Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hps1O08983 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hps1O08983 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hps1O08983 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hps1O08983 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hps1O08983 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.71■□□□□ 0.11
Hps1O08983 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hps1O08983 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hps1O08983 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hps1O08983 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hps1O08983 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
Hps1O08983 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hps1O08983 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hps1O08983 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hps1O08983 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Hps1O08983 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hps1O08983 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hps1O08983 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Hps1O08983 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.7■□□□□ 0.1
Hps1O08983 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.7■□□□□ 0.1
Hps1O08983 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.7■□□□□ 0.1
Hps1O08983 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hps1O08983 Gm15565-201ENSMUST00000118890 427 ntBASIC15.7■□□□□ 0.1
Hps1O08983 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.7■□□□□ 0.1
Hps1O08983 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.7■□□□□ 0.1
Hps1O08983 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hps1O08983 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
Hps1O08983 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.69■□□□□ 0.1
Hps1O08983 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hps1O08983 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.69■□□□□ 0.1
Hps1O08983 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Hps1O08983 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.69■□□□□ 0.1
Hps1O08983 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hps1O08983 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.69■□□□□ 0.1
Hps1O08983 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.69■□□□□ 0.1
Hps1O08983 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Hps1O08983 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hps1O08983 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hps1O08983 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hps1O08983 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hps1O08983 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Hps1O08983 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hps1O08983 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hps1O08983 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hps1O08983 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hps1O08983 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hps1O08983 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hps1O08983 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms