Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.36■□□□□ 0.37
Atf6F6VAN0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.35■□□□□ 0.37
Atf6F6VAN0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.35■□□□□ 0.37
Atf6F6VAN0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.35■□□□□ 0.37
Atf6F6VAN0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6F6VAN0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Gm21814-202ENSMUST00000203277 873 ntBASIC17.34■□□□□ 0.37
Atf6F6VAN0 Il3ra-202ENSMUST00000223589 738 ntBASIC17.34■□□□□ 0.37
Atf6F6VAN0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.34■□□□□ 0.37
Atf6F6VAN0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6F6VAN0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.33■□□□□ 0.36
Atf6F6VAN0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.33■□□□□ 0.36
Atf6F6VAN0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6F6VAN0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.32■□□□□ 0.36
Atf6F6VAN0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Gm27000-201ENSMUST00000182943 842 ntBASIC17.32■□□□□ 0.36
Atf6F6VAN0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Atf6F6VAN0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6F6VAN0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Gm18958-201ENSMUST00000174258 762 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms