Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx8D3YU81 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.91■□□□□ 0.46
Rfx8D3YU81 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.91■□□□□ 0.46
Rfx8D3YU81 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx8D3YU81 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Gm15565-201ENSMUST00000118890 427 ntBASIC17.9■□□□□ 0.46
Rfx8D3YU81 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rfx8D3YU81 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx8D3YU81 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx8D3YU81 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx8D3YU81 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx8D3YU81 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Rfx8D3YU81 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.89■□□□□ 0.45
Rfx8D3YU81 Gm11539-201ENSMUST00000119837 557 ntBASIC17.89■□□□□ 0.45
Rfx8D3YU81 Gm13436-201ENSMUST00000120418 567 ntBASIC17.89■□□□□ 0.45
Rfx8D3YU81 Gm13559-201ENSMUST00000120476 863 ntBASIC17.89■□□□□ 0.45
Rfx8D3YU81 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Gm2274-201ENSMUST00000184539 609 ntBASIC17.89■□□□□ 0.45
Rfx8D3YU81 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx8D3YU81 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.88■□□□□ 0.45
Rfx8D3YU81 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.88■□□□□ 0.45
Rfx8D3YU81 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx8D3YU81 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Gm43799-201ENSMUST00000201845 579 ntBASIC17.87■□□□□ 0.45
Rfx8D3YU81 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms