Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Usf3B2RUQ2 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.08□□□□□ -0.15
Usf3B2RUQ2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usf3B2RUQ2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Gm29791-202ENSMUST00000207888 369 ntBASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usf3B2RUQ2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Gm25016-201ENSMUST00000158399 131 ntBASIC14.06□□□□□ -0.16
Usf3B2RUQ2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Gm28033-201ENSMUST00000184224 96 ntBASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Usf3B2RUQ2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usf3B2RUQ2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms