Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brpf3B2KF05 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Gm13148-201ENSMUST00000118892 745 ntBASIC18.81■□□□□ 0.6
Brpf3B2KF05 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brpf3B2KF05 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Gm7290-201ENSMUST00000104990 617 ntBASIC18.8■□□□□ 0.6
Brpf3B2KF05 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Gm12918-201ENSMUST00000120234 636 ntBASIC18.8■□□□□ 0.6
Brpf3B2KF05 Gm15710-201ENSMUST00000121821 636 ntBASIC18.8■□□□□ 0.6
Brpf3B2KF05 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Mir6349-201ENSMUST00000184059 97 ntBASIC18.8■□□□□ 0.6
Brpf3B2KF05 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Gm5075-201ENSMUST00000196916 622 ntBASIC18.8■□□□□ 0.6
Brpf3B2KF05 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.8■□□□□ 0.6
Brpf3B2KF05 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.8■□□□□ 0.6
Brpf3B2KF05 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.8■□□□□ 0.6
Brpf3B2KF05 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brpf3B2KF05 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.79■□□□□ 0.6
Brpf3B2KF05 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brpf3B2KF05 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.78■□□□□ 0.6
Brpf3B2KF05 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brpf3B2KF05 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brpf3B2KF05 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms