Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-1A0N8R1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Gm17661-201ENSMUST00000170317 270 ntBASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-1A0N8R1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Gm27275-201ENSMUST00000184318 272 ntBASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Gm18666-201ENSMUST00000190039 958 ntBASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-1A0N8R1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Gm37025-201ENSMUST00000195159 829 ntBASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-1A0N8R1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms