Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv1-88A0A140T8N1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv1-88A0A140T8N1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv1-88A0A140T8N1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Igkv1-88A0A140T8N1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Igkv1-88A0A140T8N1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Igkv1-88A0A140T8N1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Igkv1-88A0A140T8N1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm38285-201ENSMUST00000192928 922 ntBASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Igkv1-88A0A140T8N1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm6211-202ENSMUST00000167849 925 ntBASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms