Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm42778-201ENSMUST00000199644 553 ntBASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3n-3A0A0G2JEM0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3n-3A0A0G2JEM0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms