Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gm10566-201ENSMUST00000086739 996 ntBASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Phf7-203ENSMUST00000226565 1971 ntBASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gm26039-201ENSMUST00000158152 144 ntBASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gm27389-201ENSMUST00000183622 195 ntBASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Gm44450-201ENSMUST00000199528 114 ntBASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv12-1A0A0B4J1H0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm18101-201ENSMUST00000215769 548 ntBASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms