Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-7A0A075B6B0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-7A0A075B6B0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-7A0A075B6B0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-7A0A075B6B0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-7A0A075B6B0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm10418-201ENSMUST00000100943 576 ntBASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm38285-201ENSMUST00000192928 922 ntBASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Mtag2-201ENSMUST00000058665 714 ntBASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6d-7A0A075B6B0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Mir1199-201ENSMUST00000117015 119 ntBASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav6d-7A0A075B6B0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-7A0A075B6B0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms