Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-4A0A075B631 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9n-4A0A075B631 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav9n-4A0A075B631 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav9n-4A0A075B631 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav9n-4A0A075B631 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Gm27275-201ENSMUST00000184318 272 ntBASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9n-4A0A075B631 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Gm42545-201ENSMUST00000202755 922 ntBASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9n-4A0A075B631 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms