Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm43060-201ENSMUST00000200621 289 ntBASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16d-dv11A0A075B617 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav16d-dv11A0A075B617 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm9988-201ENSMUST00000069786 435 ntBASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav16d-dv11A0A075B617 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16d-dv11A0A075B617 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16d-dv11A0A075B617 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16d-dv11A0A075B617 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16d-dv11A0A075B617 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16d-dv11A0A075B617 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16d-dv11A0A075B617 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav16d-dv11A0A075B617 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms