Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SNORA63.3-201ENST00000362682 132 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 U3.10-201ENST00000364459 214 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 MIR620-201ENST00000385232 95 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 RN7SKP166-201ENST00000410812 305 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 DPPA2P2-201ENST00000418220 897 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 SETP9-201ENST00000423837 832 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 OSTCP4-201ENST00000424397 449 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 GAPDHP19-201ENST00000431768 1005 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 OR3D1P-201ENST00000438288 955 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 KRT8P51-201ENST00000438938 274 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC007000.2-201ENST00000442564 487 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 CUBNP2-201ENST00000443534 1139 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AL512593.1-201ENST00000444758 779 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 HIGD1AP16-201ENST00000450986 258 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 EIF2S2P5-201ENST00000457635 968 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 RN7SL39P-201ENST00000462264 297 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 RN7SL393P-201ENST00000463588 296 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 CABYRP1-201ENST00000465493 1045 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC078857.1-201ENST00000469870 667 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC015524.1-201ENST00000491585 472 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 CCDC11P1-201ENST00000503137 1162 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC119751.4-201ENST00000507498 357 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC093325.1-201ENST00000508378 326 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC090958.1-201ENST00000511122 351 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 RNU6-319P-201ENST00000516025 108 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC024267.2-201ENST00000582737 417 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC016957.2-201ENST00000616998 848 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AP001284.1-201ENST00000528393 2118 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC009501.3-201ENST00000605001 1352 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 Z83820.1-201ENST00000456978 1499 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL157702.1-201ENST00000398764 426 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL121882.1-201ENST00000422893 417 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 MORF4L1P7-201ENST00000426038 703 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC128677.1-201ENST00000436016 442 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL031681.1-201ENST00000443304 400 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 CXCR2P1-202ENST00000443392 1074 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 SUMO2P1-206ENST00000445436 284 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 RAB28P3-201ENST00000448325 597 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC063955.1-201ENST00000462872 685 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC018635.1-201ENST00000468292 1030 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 RPS4XP17-201ENST00000479057 754 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 RPL23AP73-201ENST00000492507 471 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms