Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RN7SKP146-201ENST00000410242 334 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX4Q33E94 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX4Q33E94 THEM7P-201ENST00000419556 672 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AC019205.1-201ENST00000421830 730 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 RPL7AP51-201ENST00000422016 760 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 TMEM183AP1-205ENST00000432739 290 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 RPL12P18-201ENST00000437175 325 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX4Q33E94 AC023141.8-201ENST00000442554 208 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AC010240.2-201ENST00000445363 1205 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.31□□□□□ -1.56
RFX4Q33E94 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 OR7E116P-201ENST00000448529 957 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX4Q33E94 AC023245.1-201ENST00000468501 517 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 ATP5LP5-201ENST00000483050 299 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AP002453.1-201ENST00000492327 668 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX4Q33E94 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX4Q33E94 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 MT1CP-201ENST00000567054 174 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 MRPS21P8-201ENST00000569196 235 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 GARSP1-201ENST00000570895 719 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 COX6CP7-201ENST00000597056 208 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 AC015819.1-201ENST00000613588 663 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 AL512652.1-201ENST00000619006 500 ntBASIC5.31□□□□□ -1.56
RFX4Q33E94 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX4Q33E94 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.31□□□□□ -1.56
RFX4Q33E94 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.31□□□□□ -1.56
RFX4Q33E94 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFX4Q33E94 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RFX4Q33E94 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFX4Q33E94 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.3□□□□□ -1.56
RFX4Q33E94 MIR191-201ENST00000384873 92 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RFX4Q33E94 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 HYALP1-201ENST00000417674 1279 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC092865.3-201ENST00000425390 1026 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 TCEA1P3-201ENST00000443005 880 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AL445466.1-201ENST00000448432 357 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.3□□□□□ -1.56
RFX4Q33E94 KF459542.1-201ENST00000450908 553 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 PPIAP7-201ENST00000454070 489 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC005017.1-201ENST00000482002 490 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 COX6B1P2-201ENST00000489624 230 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AL049874.2-201ENST00000492636 288 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AC108103.1-201ENST00000511286 446 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AC098976.1-201ENST00000513014 541 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC020937.1-201ENST00000519677 1013 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AP000620.1-201ENST00000527147 504 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.3□□□□□ -1.56
RFX4Q33E94 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.3□□□□□ -1.56
RFX4Q33E94 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC008507.3-201ENST00000585753 472 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC005479.3-201ENST00000602790 431 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 OR51C1P-201ENST00000608504 942 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AC073389.3-201ENST00000609434 935 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AC092681.3-201ENST00000609463 678 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AL356608.1-201ENST00000610034 820 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AL135999.3-201ENST00000610501 812 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AL139099.4-201ENST00000614802 114 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 PARP4P2-201ENST00000446672 3326 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC012254.3-201ENST00000591183 2117 ntBASIC5.3□□□□□ -1.56
RFX4Q33E94 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFX4Q33E94 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX4Q33E94 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.3□□□□□ -1.56
RFX4Q33E94 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX4Q33E94 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms