Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC079600.1-201ENST00000550326 297 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.85□□□□□ -1.47
LIMK2P53671 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK2P53671 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK2P53671 GARSP1-201ENST00000570895 719 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK2P53671 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 AL031601.1-201ENST00000605702 394 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 AL136131.3-201ENST00000607600 188 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 AL354950.1-201ENST00000614150 568 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK2P53671 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
LIMK2P53671 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMK2P53671 AC114774.1-201ENST00000507410 1770 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LIMK2P53671 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.84□□□□□ -1.47
LIMK2P53671 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 AC027279.4-201ENST00000624371 2072 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 RNA5SP91-201ENST00000390902 119 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMK2P53671 PCBP2P1-201ENST00000437262 977 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMK2P53671 AC015983.1-201ENST00000441577 373 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 AL161636.2-201ENST00000445179 927 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LIMK2P53671 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.84□□□□□ -1.47
LIMK2P53671 RN7SL269P-201ENST00000467795 305 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 AL157777.1-201ENST00000468100 304 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 AL122020.1-201ENST00000472287 459 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 RN7SL273P-201ENST00000481561 299 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMK2P53671 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.84□□□□□ -1.47
LIMK2P53671 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMK2P53671 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 AC015849.6-201ENST00000605454 474 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 AL021918.2-201ENST00000613415 194 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 AC126175.1-201ENST00000617041 758 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 AC132825.8-201ENST00000640783 297 ntBASIC5.84□□□□□ -1.47
LIMK2P53671 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK2P53671 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK2P53671 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LIMK2P53671 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
LIMK2P53671 RNF19BPY-201ENST00000458209 1550 ntBASIC5.84□□□□□ -1.48
LIMK2P53671 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.83□□□□□ -1.48
LIMK2P53671 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK2P53671 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK2P53671 AC015689.2-201ENST00000528172 1738 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 AC011933.2-201ENST00000578539 2790 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LIMK2P53671 SELENOWP1-201ENST00000322792 252 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 RNU1-150P-201ENST00000362491 162 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 SNORA51.1-201ENST00000363243 140 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 RN7SKP292-201ENST00000365522 317 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
LIMK2P53671 RNU6-167P-201ENST00000384292 106 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 AC087752.1-201ENST00000391360 558 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LIMK2P53671 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMK2P53671 BX276092.6-201ENST00000430476 250 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 BMS1P10-201ENST00000443754 1120 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMK2P53671 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMK2P53671 AC009963.4-201ENST00000448535 339 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 AL445665.1-202ENST00000452436 324 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 GEMIN2P1-201ENST00000454246 752 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 BX276092.8-201ENST00000455722 250 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 RNU1-88P-201ENST00000459274 128 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms