Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 SNORA64.3-201ENST00000365647 134 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 SNORA48.4-201ENST00000391089 134 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 EI24P3-201ENST00000399046 1062 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 SNORA81-201ENST00000408493 178 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 UBTFL2-201ENST00000411859 1191 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC211486.3-201ENST00000412694 621 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 NDUFB4P8-201ENST00000435351 367 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 PCBP2P1-201ENST00000437262 977 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC021660.1-201ENST00000465006 554 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 RPS7P11-201ENST00000484240 586 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC083795.1-201ENST00000491760 320 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 MYL12BP2-201ENST00000503948 512 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 MAST4-IT1-201ENST00000514241 658 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC084851.2-201ENST00000530377 364 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 RN7SL475P-201ENST00000583379 298 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 MIR212-201ENST00000586026 110 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC114477.1-201ENST00000605097 605 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AL589743.6-201ENST00000611025 117 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC007603.3-201ENST00000636915 979 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 RBMY1HP-201ENST00000382759 1389 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 TRIM51GP-201ENST00000534741 1350 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC020633.1-201ENST00000468439 2247 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL121886.1-201ENST00000358609 435 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 RNU6-167P-201ENST00000384292 106 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 YWHAZP4-201ENST00000392459 708 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 RPL21P67-201ENST00000402896 478 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC244033.1-201ENST00000426826 870 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 TMEM183AP1-205ENST00000432739 290 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 EMC3-AS1-205ENST00000438698 534 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 SOCS5P1-201ENST00000440415 949 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 GAPDHP37-201ENST00000442317 968 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC092601.1-201ENST00000444526 383 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 VN1R96P-201ENST00000446052 858 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC004129.2-201ENST00000457229 287 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 TPT1P1-201ENST00000458495 518 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 RNA5SP103-201ENST00000459503 118 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 RN7SL39P-201ENST00000462264 297 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC105384.2-201ENST00000508433 640 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 KHDC1P1-201ENST00000511053 508 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC093664.1-201ENST00000511779 289 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms