Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AL157777.1-201ENST00000468100 304 ntBASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AC007998.1-201ENST00000474156 672 ntBASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AC087272.1-201ENST00000523624 533 ntBASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AP001804.1-201ENST00000526868 919 ntBASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 HMGN2P36-201ENST00000529541 409 ntBASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AL360012.1-201ENST00000602813 131 ntBASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 NF1P10-201ENST00000613227 742 ntBASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.28□□□□□ -1.4
SNX9Q9Y5X1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC106872.5-201ENST00000508856 1416 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AL365220.1-201ENST00000432923 399 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 RPL23AP19-201ENST00000436229 369 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 VN1R96P-201ENST00000446052 858 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 SNORA70.20-201ENST00000516848 126 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC079600.1-201ENST00000550326 297 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC007346.2-201ENST00000564816 892 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AL133406.3-201ENST00000606817 541 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AC069234.4-201ENST00000621276 412 ntBASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNX9Q9Y5X1 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 Z95114.1-201ENST00000624264 14574 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AC140479.2-201ENST00000421567 3130 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AL137141.1-201ENST00000624622 4836 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 RNA5SP284-201ENST00000384547 118 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 U3.23-201ENST00000391132 200 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 OR7E101P-201ENST00000400428 513 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 RPS3AP2-201ENST00000407190 754 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 EEF1B2P8-201ENST00000414101 671 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms