Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 LINC02019-201ENST00000608605 2060 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 RN7SKP77-201ENST00000363261 353 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 RNA5SP433-201ENST00000364491 114 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AC004386.1-201ENST00000393214 761 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 CBX1P2-201ENST00000453841 458 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AL122020.1-201ENST00000472287 459 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AC099521.1-201ENST00000482557 334 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AL121594.2-201ENST00000541658 472 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AC079905.1-201ENST00000549280 475 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 LINC00556-201ENST00000569603 412 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 MIR6133-201ENST00000617057 108 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 AC027088.4-201ENST00000611559 1947 ntBASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC4Q9Y296 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 IFIT1P1-201ENST00000400497 1449 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL162456.1-201ENST00000634535 2006 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 U3.7-201ENST00000363668 216 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 CXADRP1-201ENST00000398098 1095 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 BX284632.2-201ENST00000421091 399 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC242426.1-201ENST00000435270 960 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC110602.1-201ENST00000437414 318 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL512605.1-202ENST00000441919 381 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL359955.2-201ENST00000445380 353 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 RPL12P39-201ENST00000455456 496 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AP002884.1-201ENST00000479691 655 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 RN7SL193P-201ENST00000491708 276 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 RPL37P23-201ENST00000492641 294 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 GAPDHP71-201ENST00000511530 1003 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 RNA5SP340-201ENST00000517132 107 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC078899.1-201ENST00000521432 1185 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 GTF2IP11-201ENST00000526931 420 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC027369.2-201ENST00000528030 440 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 MIR4776-2-201ENST00000580204 80 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms