Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC007204.2-201ENST00000615022 616 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AL161901.1-201ENST00000624954 3425 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 MTATP6P31-201ENST00000406985 692 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 PPIAP10-201ENST00000438675 458 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 DNAJB5P1-201ENST00000454004 806 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AC115223.1-201ENST00000466377 870 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AC022415.1-202ENST00000486612 523 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 HAUS1P1-201ENST00000505275 832 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 OR5D15P-201ENST00000531671 942 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AC090616.1-201ENST00000583895 447 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AC090912.3-201ENST00000609775 533 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AC090510.2-201ENST00000617465 629 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AL163051.2-201ENST00000618976 735 ntBASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.4□□□□□ -1.22
SMC1BQ8NDV3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
SMC1BQ8NDV3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.4□□□□□ -1.23
SMC1BQ8NDV3 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.4□□□□□ -1.23
SMC1BQ8NDV3 AC023421.1-201ENST00000590535 1785 ntBASIC7.4□□□□□ -1.23
SMC1BQ8NDV3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SMC1BQ8NDV3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
SMC1BQ8NDV3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
SMC1BQ8NDV3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 MTCO1P25-201ENST00000414449 1799 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC104837.1-201ENST00000444644 1587 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 RNU6-697P-201ENST00000363348 107 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 SNORD115-48-201ENST00000364764 76 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AL807761.1-201ENST00000417622 171 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 NPM1P26-201ENST00000426339 738 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AL139148.1-201ENST00000427122 680 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 ARL5AP3-201ENST00000439327 386 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC007000.2-201ENST00000442564 487 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC011742.2-201ENST00000443818 352 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 LRRC37A14P-201ENST00000452297 462 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 RPL5P12-201ENST00000477071 851 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 MTCO2P9-201ENST00000503214 694 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 KCTD9P6-201ENST00000522306 950 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC023158.1-201ENST00000561632 1025 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 FKBP1AP1-201ENST00000594588 318 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms