Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZNF806-201ENST00000438300 1774 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
NR1H2P55055 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
NR1H2P55055 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NR1H2P55055 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.46
NR1H2P55055 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NR1H2P55055 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NR1H2P55055 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 RNA5SP478-201ENST00000364657 115 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.9□□□□□ -1.46
NR1H2P55055 PAICSP2-201ENST00000429118 1150 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.9□□□□□ -1.46
NR1H2P55055 GTF3AP6-201ENST00000432585 986 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 USP24P1-201ENST00000433802 779 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AL645939.3-201ENST00000435408 225 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AL590762.3-201ENST00000436372 640 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC015983.1-201ENST00000441577 373 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC023512.1-201ENST00000444513 499 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.9□□□□□ -1.46
NR1H2P55055 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.9□□□□□ -1.46
NR1H2P55055 AC099340.1-201ENST00000475247 599 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC020779.1-201ENST00000478757 796 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 NPM1P28-201ENST00000492269 840 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 RN7SL568P-201ENST00000493069 298 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.9□□□□□ -1.46
NR1H2P55055 AC008945.1-201ENST00000505144 499 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NR1H2P55055 AC025768.1-201ENST00000510057 267 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 GUSBP9-201ENST00000510138 584 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.9□□□□□ -1.46
NR1H2P55055 AC093816.1-201ENST00000515076 913 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 RN7SKP70-201ENST00000516655 271 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.9□□□□□ -1.46
NR1H2P55055 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.9□□□□□ -1.46
NR1H2P55055 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.9□□□□□ -1.46
NR1H2P55055 AC233266.2-201ENST00000567067 528 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.9□□□□□ -1.46
NR1H2P55055 AC125494.2-201ENST00000602431 657 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC012368.3-201ENST00000604190 219 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC034236.3-201ENST00000605999 461 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AC092953.2-201ENST00000608000 699 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 uc_338.29-201ENST00000615099 168 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 AC025016.1-201ENST00000616746 682 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AP001264.1-201ENST00000620602 703 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 AL683826.1-201ENST00000624104 627 ntBASIC5.9□□□□□ -1.46
NR1H2P55055 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NR1H2P55055 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NR1H2P55055 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NR1H2P55055 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NR1H2P55055 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NR1H2P55055 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NR1H2P55055 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NR1H2P55055 AL359715.3-201ENST00000569267 2123 ntBASIC5.9□□□□□ -1.47
NR1H2P55055 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
NR1H2P55055 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.9□□□□□ -1.47
NR1H2P55055 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.9□□□□□ -1.47
NR1H2P55055 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.9□□□□□ -1.47
NR1H2P55055 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NR1H2P55055 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NR1H2P55055 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NR1H2P55055 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.9□□□□□ -1.47
NR1H2P55055 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.9□□□□□ -1.47
NR1H2P55055 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
NR1H2P55055 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.9□□□□□ -1.47
NR1H2P55055 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 MTCO1P15-201ENST00000529569 1526 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NR1H2P55055 SMG1P5-202ENST00000529428 4219 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 SMG1P2-201ENST00000566127 4221 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NR1H2P55055 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 RNU1-65P-201ENST00000363919 148 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NR1H2P55055 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 U3.43-201ENST00000410734 213 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 AL359885.1-201ENST00000415786 903 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 RPA2P2-201ENST00000419698 796 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 AL139158.1-201ENST00000424719 340 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms