Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL139824.2-201ENST00000458731 1095 ntBASIC7.24□□□□□ -1.25
MRE11P49959 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 LARP7P4-201ENST00000481075 878 ntBASIC7.24□□□□□ -1.25
MRE11P49959 RN7SL37P-201ENST00000490461 307 ntBASIC7.24□□□□□ -1.25
MRE11P49959 RN7SL362P-201ENST00000494228 267 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 Y_RNA.717-201ENST00000517106 92 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC140063.1-201ENST00000541343 259 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 AL132640.1-201ENST00000559594 619 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.24□□□□□ -1.25
MRE11P49959 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 AL158050.2-201ENST00000605336 568 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AC112220.2-201ENST00000605513 533 ntBASIC7.24□□□□□ -1.25
MRE11P49959 CR589904.2-201ENST00000612533 440 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AL096712.1-201ENST00000614561 159 ntBASIC7.24□□□□□ -1.25
MRE11P49959 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC087894.3-201ENST00000623682 349 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 SNORA17.5-201ENST00000630429 132 ntBASIC7.24□□□□□ -1.25
MRE11P49959 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 AC005261.2-201ENST00000593427 4258 ntBASIC7.24□□□□□ -1.25
MRE11P49959 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
MRE11P49959 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
MRE11P49959 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
MRE11P49959 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 AL607077.1-201ENST00000401718 499 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AL589655.1-201ENST00000405398 482 ntBASIC7.23□□□□□ -1.25
MRE11P49959 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.23□□□□□ -1.25
MRE11P49959 RNU6-584P-201ENST00000410350 95 ntBASIC7.23□□□□□ -1.25
MRE11P49959 SSR1P2-201ENST00000415208 787 ntBASIC7.23□□□□□ -1.25
MRE11P49959 TRGV7-201ENST00000427089 353 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AC092017.2-201ENST00000427600 362 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AC007365.2-201ENST00000428806 458 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.23□□□□□ -1.25
MRE11P49959 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.23□□□□□ -1.25
MRE11P49959 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.23□□□□□ -1.25
MRE11P49959 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.23□□□□□ -1.25
MRE11P49959 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.23□□□□□ -1.25
MRE11P49959 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.23□□□□□ -1.25
MRE11P49959 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 AC026348.1-201ENST00000462549 1053 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AC093827.1-201ENST00000480094 861 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AC008410.1-201ENST00000483777 339 ntBASIC7.23□□□□□ -1.25
MRE11P49959 CIR1P1-201ENST00000524055 1133 ntBASIC7.23□□□□□ -1.25
MRE11P49959 OR10D4P-201ENST00000525892 951 ntBASIC7.23□□□□□ -1.25
MRE11P49959 DPPA3P2-202ENST00000557188 1219 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.23□□□□□ -1.25
MRE11P49959 AC106785.3-201ENST00000564064 847 ntBASIC7.23□□□□□ -1.25
MRE11P49959 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.23□□□□□ -1.25
MRE11P49959 AC140725.3-201ENST00000616193 880 ntBASIC7.23□□□□□ -1.25
MRE11P49959 MRPL57P3-201ENST00000619218 176 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AC103703.1-201ENST00000634783 663 ntBASIC7.23□□□□□ -1.25
MRE11P49959 AC010325.3-201ENST00000641084 394 ntBASIC7.23□□□□□ -1.25
MRE11P49959 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.23□□□□□ -1.25
MRE11P49959 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
MRE11P49959 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
MRE11P49959 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 AC004076.2-201ENST00000620532 3323 ntBASIC7.22□□□□□ -1.25
MRE11P49959 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.22□□□□□ -1.25
MRE11P49959 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.22□□□□□ -1.25
MRE11P49959 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
MRE11P49959 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.22□□□□□ -1.25
MRE11P49959 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
MRE11P49959 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.22□□□□□ -1.25
MRE11P49959 AC019178.1-201ENST00000392337 440 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms