Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX1P48742 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX1P48742 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX1P48742 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX1P48742 AC011445.2-201ENST00000599274 173 ntBASIC6.13□□□□□ -1.43
LHX1P48742 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 AC063977.5-201ENST00000601044 974 ntBASIC6.13□□□□□ -1.43
LHX1P48742 AC009237.12-201ENST00000604755 742 ntBASIC6.13□□□□□ -1.43
LHX1P48742 AC090607.5-201ENST00000615692 224 ntBASIC6.13□□□□□ -1.43
LHX1P48742 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.13□□□□□ -1.43
LHX1P48742 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 AL355480.1-201ENST00000629041 99 ntBASIC6.13□□□□□ -1.43
LHX1P48742 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.13□□□□□ -1.43
LHX1P48742 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
LHX1P48742 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 AL117378.2-201ENST00000622916 1337 ntBASIC6.13□□□□□ -1.43
LHX1P48742 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX1P48742 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.13□□□□□ -1.43
LHX1P48742 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX1P48742 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
LHX1P48742 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX1P48742 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LHX1P48742 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
LHX1P48742 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LHX1P48742 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 AC087752.1-201ENST00000391360 558 ntBASIC6.12□□□□□ -1.43
LHX1P48742 MTND4LP17-201ENST00000414607 293 ntBASIC6.12□□□□□ -1.43
LHX1P48742 AL662874.1-201ENST00000426065 230 ntBASIC6.12□□□□□ -1.43
LHX1P48742 CRIP1P1-201ENST00000427567 185 ntBASIC6.12□□□□□ -1.43
LHX1P48742 RPL12P16-201ENST00000431098 498 ntBASIC6.12□□□□□ -1.43
LHX1P48742 ZNF101P1-201ENST00000435701 1720 ntBASIC6.12□□□□□ -1.43
LHX1P48742 GAPDHP48-201ENST00000436626 961 ntBASIC6.12□□□□□ -1.43
LHX1P48742 AC005297.1-201ENST00000444765 862 ntBASIC6.12□□□□□ -1.43
LHX1P48742 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX1P48742 RPS23P2-201ENST00000463671 415 ntBASIC6.12□□□□□ -1.43
LHX1P48742 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.12□□□□□ -1.43
LHX1P48742 RN7SL101P-201ENST00000496350 279 ntBASIC6.12□□□□□ -1.43
LHX1P48742 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.12□□□□□ -1.43
LHX1P48742 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.12□□□□□ -1.43
LHX1P48742 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX1P48742 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX1P48742 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX1P48742 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX1P48742 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX1P48742 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 NANOGP3-201ENST00000605855 286 ntBASIC6.12□□□□□ -1.43
LHX1P48742 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX1P48742 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX1P48742 AL390318.1-201ENST00000624564 687 ntBASIC6.12□□□□□ -1.43
LHX1P48742 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LHX1P48742 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LHX1P48742 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LHX1P48742 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LHX1P48742 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX1P48742 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX1P48742 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.12□□□□□ -1.43
LHX1P48742 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX1P48742 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
LHX1P48742 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LHX1P48742 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.11□□□□□ -1.43
LHX1P48742 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LHX1P48742 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
LHX1P48742 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
LHX1P48742 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.11□□□□□ -1.43
LHX1P48742 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LHX1P48742 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.11□□□□□ -1.43
LHX1P48742 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
LHX1P48742 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
LHX1P48742 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.11□□□□□ -1.43
LHX1P48742 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LHX1P48742 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
LHX1P48742 SNORA64.1-201ENST00000362600 132 ntBASIC6.11□□□□□ -1.43
LHX1P48742 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
LHX1P48742 RNU4-64P-201ENST00000410795 131 ntBASIC6.11□□□□□ -1.43
LHX1P48742 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.11□□□□□ -1.43
LHX1P48742 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.11□□□□□ -1.43
LHX1P48742 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.11□□□□□ -1.43
LHX1P48742 CHEK2P5-201ENST00000423877 246 ntBASIC6.11□□□□□ -1.43
LHX1P48742 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.11□□□□□ -1.43
LHX1P48742 AC073410.1-201ENST00000435125 589 ntBASIC6.11□□□□□ -1.43
LHX1P48742 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.11□□□□□ -1.43
LHX1P48742 RN7SL174P-201ENST00000475578 289 ntBASIC6.11□□□□□ -1.43
LHX1P48742 RN7SL717P-201ENST00000478343 297 ntBASIC6.11□□□□□ -1.43
LHX1P48742 AC087672.1-201ENST00000479876 766 ntBASIC6.11□□□□□ -1.43
LHX1P48742 AC073610.1-201ENST00000489971 396 ntBASIC6.11□□□□□ -1.43
LHX1P48742 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.11□□□□□ -1.43
LHX1P48742 MRPS16P1-201ENST00000523462 412 ntBASIC6.11□□□□□ -1.43
LHX1P48742 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms