Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC114728.1-201ENST00000488289 483 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC090543.1-201ENST00000492168 485 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 FTH1P8-201ENST00000498161 514 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC011411.1-201ENST00000509592 876 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 SUMO2P19-201ENST00000518920 295 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 OR4V1P-201ENST00000525394 1140 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 DNAJC19P3-201ENST00000594491 331 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC027243.2-201ENST00000602530 724 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AL133247.2-201ENST00000603236 482 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 MIR6809-201ENST00000612189 116 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC127024.6-201ENST00000621598 424 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC079298.2-201ENST00000623885 459 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC103703.1-201ENST00000634783 663 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AC110792.3-201ENST00000595906 1614 ntBASIC6.07□□□□□ -1.44
TBC1D3FA6NER0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC011815.2-201ENST00000618230 2021 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 GNL2P1-201ENST00000451274 2190 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 TMSB4XP4-201ENST00000323496 618 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 FUNDC2P3-201ENST00000334716 533 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 RNA5SP284-201ENST00000384547 118 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 SNORA17A-201ENST00000391185 133 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 MIR1203-201ENST00000408812 85 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 RN7SKP206-201ENST00000410823 293 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 MTND6P12-201ENST00000428247 522 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AP002345.1-201ENST00000456493 928 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 NXT1P1-201ENST00000458481 316 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AK4P6-201ENST00000505168 528 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 MIR4776-2-201ENST00000580204 80 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AL445493.3-201ENST00000619568 477 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AL357562.1-201ENST00000624911 609 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 SNORA17.5-201ENST00000630429 132 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 Z83820.1-201ENST00000456978 1499 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 ZNF402P-201ENST00000404435 3100 ntBASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.06□□□□□ -1.44
TBC1D3FA6NER0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 ZNF101P1-201ENST00000435701 1720 ntBASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 AL136520.1-201ENST00000600311 1322 ntBASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.05□□□□□ -1.44
TBC1D3FA6NER0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms