Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC091078.2-201ENST00000557145 559 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC007225.2-201ENST00000562529 256 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC016180.1-201ENST00000567945 403 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC005244.1-201ENST00000582566 339 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC108673.3-201ENST00000609183 335 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AL512624.1-201ENST00000613638 469 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC027279.4-201ENST00000624371 2072 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AF287957.1-201ENST00000607368 1595 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AC087752.1-201ENST00000391360 558 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 ATP5LP2-201ENST00000440646 311 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 SUMO2P1-206ENST00000445436 284 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 PPIAP27-201ENST00000453800 265 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AC092865.4-201ENST00000477936 615 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 PDCL3P4-201ENST00000489621 720 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AC025458.1-201ENST00000506046 166 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AC105384.2-201ENST00000508433 640 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 MIR4776-2-201ENST00000580204 80 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 MIR6730-201ENST00000622213 67 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 FO681491.1-202ENST00000623392 737 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 AC129915.3-201ENST00000634128 948 ntBASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
UPF3BQ9BZI7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
UPF3BQ9BZI7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
UPF3BQ9BZI7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.9□□□□□ -1.31
UPF3BQ9BZI7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.9□□□□□ -1.31
UPF3BQ9BZI7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
UPF3BQ9BZI7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC093297.3-201ENST00000607056 2517 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC232271.1-201ENST00000602455 2715 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 RNA5SP284-201ENST00000384547 118 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC023194.2-201ENST00000465398 406 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 RN7SL284P-201ENST00000498823 275 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 RNA5SP271-201ENST00000516700 88 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC060775.1-201ENST00000518241 520 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC136777.2-201ENST00000522979 358 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC025857.2-201ENST00000602711 238 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC009237.12-201ENST00000604755 742 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC022467.1-201ENST00000614738 749 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AL139099.4-201ENST00000614802 114 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AC126175.1-201ENST00000617041 758 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 SAMMSON-210ENST00000641260 1308 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 NCOA4P2-201ENST00000340589 1813 ntBASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms