Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC024587.1-201ENST00000505925 2157 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 Z83820.1-201ENST00000456978 1499 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 MIR421-201ENST00000365696 85 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 ST13P16-201ENST00000401760 781 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 DNAJA1P5-201ENST00000440278 943 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AP002345.1-201ENST00000456493 928 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC098847.1-201ENST00000473094 348 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC106806.2-201ENST00000509365 500 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC079315.1-201ENST00000602952 623 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AL365181.4-201ENST00000609800 547 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AL080312.2-201ENST00000613001 630 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC093225.1-201ENST00000506867 1408 ntBASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4CQ96CF2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC011504.1-201ENST00000623331 4103 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC245884.2-201ENST00000426257 404 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AL353662.1-201ENST00000439099 327 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 EIF5AP4-201ENST00000441206 465 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 HIGD1AP16-201ENST00000450986 258 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC073594.1-201ENST00000462065 364 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 MIMT1-201ENST00000597105 1050 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AL133247.2-201ENST00000603236 482 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AL591167.1-201ENST00000607321 456 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 MIR6861-201ENST00000618657 64 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AL512652.1-201ENST00000619006 500 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC009120.7-201ENST00000623452 780 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 MIR1910-201ENST00000636955 80 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC106858.1-201ENST00000637497 429 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 HDAC1P2-201ENST00000453661 1398 ntBASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CHMP4CQ96CF2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC119674.1-202ENST00000641333 1860 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms