Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MR1-209ENST00000617803 7584 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LMO4P61968 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO4P61968 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
LMO4P61968 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LMO4P61968 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 RARSP1-201ENST00000542842 1418 ntBASIC4.83□□□□□ -1.64
LMO4P61968 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 OR3A2-201ENST00000408891 1076 ntBASIC4.83□□□□□ -1.64
LMO4P61968 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO4P61968 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO4P61968 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO4P61968 EEF1B2P6-201ENST00000445713 673 ntBASIC4.83□□□□□ -1.64
LMO4P61968 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 FRG2FP-204ENST00000453982 852 ntBASIC4.83□□□□□ -1.64
LMO4P61968 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LMO4P61968 AC074386.1-201ENST00000476560 767 ntBASIC4.83□□□□□ -1.64
LMO4P61968 AP001960.1-201ENST00000506494 658 ntBASIC4.83□□□□□ -1.64
LMO4P61968 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO4P61968 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LMO4P61968 SCARNA6.1-201ENST00000516989 238 ntBASIC4.83□□□□□ -1.64
LMO4P61968 RNU6-467P-201ENST00000517027 110 ntBASIC4.83□□□□□ -1.64
LMO4P61968 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO4P61968 AC007225.2-201ENST00000562529 256 ntBASIC4.83□□□□□ -1.64
LMO4P61968 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO4P61968 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 ADAD1P2-201ENST00000588476 646 ntBASIC4.83□□□□□ -1.64
LMO4P61968 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 AC010615.3-201ENST00000597319 394 ntBASIC4.83□□□□□ -1.64
LMO4P61968 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 BNIP3P35-201ENST00000604530 490 ntBASIC4.83□□□□□ -1.64
LMO4P61968 AC007423.1-201ENST00000605009 627 ntBASIC4.83□□□□□ -1.64
LMO4P61968 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 SNORA35B-201ENST00000607417 129 ntBASIC4.83□□□□□ -1.64
LMO4P61968 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.83□□□□□ -1.64
LMO4P61968 AP001885.1-201ENST00000621658 558 ntBASIC4.83□□□□□ -1.64
LMO4P61968 CU639417.4-201ENST00000623928 207 ntBASIC4.83□□□□□ -1.64
LMO4P61968 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 AL590396.2-201ENST00000636511 1041 ntBASIC4.83□□□□□ -1.64
LMO4P61968 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO4P61968 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LMO4P61968 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMO4P61968 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LMO4P61968 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 ABCA11P-202ENST00000504019 2110 ntBASIC4.82□□□□□ -1.64
LMO4P61968 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 AC027279.4-201ENST00000624371 2072 ntBASIC4.82□□□□□ -1.64
LMO4P61968 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 SALL4P7-201ENST00000555779 3120 ntBASIC4.82□□□□□ -1.64
LMO4P61968 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LMO4P61968 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 RNA5SP132-201ENST00000364725 118 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AL391361.1-201ENST00000405580 489 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AL596448.1-201ENST00000415024 392 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AC017078.1-201ENST00000416146 368 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AC015977.1-201ENST00000418887 292 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO4P61968 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 AC005297.1-201ENST00000444765 862 ntBASIC4.82□□□□□ -1.64
LMO4P61968 RPS26P39-201ENST00000469206 341 ntBASIC4.82□□□□□ -1.64
LMO4P61968 RPL38P3-201ENST00000484463 213 ntBASIC4.82□□□□□ -1.64
LMO4P61968 MTND3P6-201ENST00000485242 339 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AC009120.1-201ENST00000493458 473 ntBASIC4.82□□□□□ -1.64
LMO4P61968 OR7E157P-201ENST00000494376 911 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.82□□□□□ -1.64
LMO4P61968 RN7SKP288-201ENST00000516227 268 ntBASIC4.82□□□□□ -1.64
LMO4P61968 MIR2117-201ENST00000516780 80 ntBASIC4.82□□□□□ -1.64
LMO4P61968 RNU6-943P-201ENST00000516960 98 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AC021678.3-201ENST00000517893 476 ntBASIC4.82□□□□□ -1.64
LMO4P61968 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 KCTD9P6-201ENST00000522306 950 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms