Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH11P55287 AC140134.1-201ENST00000511830 3544 ntBASIC5.46□□□□□ -1.54
CDH11P55287 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.46□□□□□ -1.54
CDH11P55287 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH11P55287 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH11P55287 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH11P55287 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CDH11P55287 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH11P55287 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CDH11P55287 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH11P55287 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH11P55287 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CDH11P55287 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 AL607077.1-201ENST00000401718 499 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 AC079807.1-201ENST00000429993 481 ntBASIC5.46□□□□□ -1.54
CDH11P55287 RPL6P30-201ENST00000443382 862 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AL358876.1-201ENST00000453364 1075 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH11P55287 CCDC11P1-201ENST00000503137 1162 ntBASIC5.46□□□□□ -1.54
CDH11P55287 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 KHDC1P1-201ENST00000511053 508 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH11P55287 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH11P55287 AC136777.2-201ENST00000522979 358 ntBASIC5.46□□□□□ -1.54
CDH11P55287 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH11P55287 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH11P55287 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CDH11P55287 MRPS21P8-201ENST00000569196 235 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AC005726.4-201ENST00000582858 458 ntBASIC5.46□□□□□ -1.54
CDH11P55287 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH11P55287 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 AC025857.2-201ENST00000602711 238 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AC008555.7-201ENST00000605008 583 ntBASIC5.46□□□□□ -1.54
CDH11P55287 KATNBL1P1-201ENST00000605192 748 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AC096586.2-201ENST00000610260 441 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AC022400.9-201ENST00000623633 273 ntBASIC5.46□□□□□ -1.54
CDH11P55287 AC004808.2-201ENST00000627965 773 ntBASIC5.46□□□□□ -1.54
CDH11P55287 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH11P55287 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH11P55287 NLRP3P1-201ENST00000622303 1785 ntBASIC5.46□□□□□ -1.54
CDH11P55287 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH11P55287 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH11P55287 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH11P55287 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 AL049634.1-201ENST00000453770 1720 ntBASIC5.45□□□□□ -1.54
CDH11P55287 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 AC006600.2-201ENST00000624834 2506 ntBASIC5.45□□□□□ -1.54
CDH11P55287 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 QRSL1P1-201ENST00000400977 1540 ntBASIC5.45□□□□□ -1.54
CDH11P55287 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 COX6B1P3-201ENST00000312310 260 ntBASIC5.45□□□□□ -1.54
CDH11P55287 RNA5SP375-201ENST00000362975 119 ntBASIC5.45□□□□□ -1.54
CDH11P55287 RNA5SP346-201ENST00000363541 121 ntBASIC5.45□□□□□ -1.54
CDH11P55287 RNU6-670P-201ENST00000364312 104 ntBASIC5.45□□□□□ -1.54
CDH11P55287 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH11P55287 MTATP6P11-201ENST00000428071 670 ntBASIC5.45□□□□□ -1.54
CDH11P55287 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 AC110602.1-201ENST00000437414 318 ntBASIC5.45□□□□□ -1.54
CDH11P55287 EIF5AP4-201ENST00000441206 465 ntBASIC5.45□□□□□ -1.54
CDH11P55287 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 AL133351.3-201ENST00000454998 193 ntBASIC5.45□□□□□ -1.54
CDH11P55287 RNU7-157P-201ENST00000459600 66 ntBASIC5.45□□□□□ -1.54
CDH11P55287 RPL12P31-201ENST00000478433 450 ntBASIC5.45□□□□□ -1.54
CDH11P55287 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 AC095052.1-201ENST00000509955 863 ntBASIC5.45□□□□□ -1.54
CDH11P55287 AC021146.10-201ENST00000515628 706 ntBASIC5.45□□□□□ -1.54
CDH11P55287 RN7SKP288-201ENST00000516227 268 ntBASIC5.45□□□□□ -1.54
CDH11P55287 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH11P55287 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH11P55287 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH11P55287 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH11P55287 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH11P55287 AC007346.1-201ENST00000569208 867 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 427.4 ms