Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CLCN3P51790 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CLCN3P51790 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 OR6E1P-201ENST00000414424 923 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 OR5W1P-201ENST00000423705 938 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.38□□□□□ -1.39
CLCN3P51790 AC015983.1-201ENST00000441577 373 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 RSL24D1P2-201ENST00000445584 366 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.38□□□□□ -1.39
CLCN3P51790 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.38□□□□□ -1.39
CLCN3P51790 RPS26P39-201ENST00000469206 341 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 RN7SL466P-201ENST00000497546 295 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 AC113398.2-201ENST00000507630 558 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.38□□□□□ -1.39
CLCN3P51790 AC021678.3-201ENST00000517893 476 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 AC008429.4-201ENST00000521201 182 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.38□□□□□ -1.39
CLCN3P51790 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.38□□□□□ -1.39
CLCN3P51790 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.38□□□□□ -1.39
CLCN3P51790 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.38□□□□□ -1.39
CLCN3P51790 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.38□□□□□ -1.39
CLCN3P51790 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.38□□□□□ -1.39
CLCN3P51790 AC130360.2-201ENST00000533477 1556 ntBASIC6.38□□□□□ -1.39
CLCN3P51790 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
CLCN3P51790 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.38□□□□□ -1.39
CLCN3P51790 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CLCN3P51790 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CLCN3P51790 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.38□□□□□ -1.39
CLCN3P51790 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLCN3P51790 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.37□□□□□ -1.39
CLCN3P51790 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.37□□□□□ -1.39
CLCN3P51790 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.37□□□□□ -1.39
CLCN3P51790 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.37□□□□□ -1.39
CLCN3P51790 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CLCN3P51790 AC022164.1-201ENST00000568767 2673 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.37□□□□□ -1.39
CLCN3P51790 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CLCN3P51790 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 MTCO1P22-201ENST00000604619 1360 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.37□□□□□ -1.39
CLCN3P51790 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.37□□□□□ -1.39
CLCN3P51790 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 RMRPP5-201ENST00000411156 267 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.37□□□□□ -1.39
CLCN3P51790 FMO7P-201ENST00000436045 768 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.37□□□□□ -1.39
CLCN3P51790 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.37□□□□□ -1.39
CLCN3P51790 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.37□□□□□ -1.39
CLCN3P51790 AC005297.1-201ENST00000444765 862 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.37□□□□□ -1.39
CLCN3P51790 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.37□□□□□ -1.39
CLCN3P51790 MTND3P6-201ENST00000485242 339 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 AC147055.1-201ENST00000509261 750 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 ATP5LP3-201ENST00000514223 304 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.37□□□□□ -1.39
CLCN3P51790 AC090424.1-201ENST00000535243 736 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.37□□□□□ -1.39
CLCN3P51790 AL049779.3-201ENST00000557141 606 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 AC096996.1-201ENST00000563813 325 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 AC090286.3-201ENST00000573133 187 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 MIR4489-201ENST00000578869 62 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 AL691477.1-201ENST00000624398 162 ntBASIC6.37□□□□□ -1.39
CLCN3P51790 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CLCN3P51790 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CLCN3P51790 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.37□□□□□ -1.39
CLCN3P51790 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.37□□□□□ -1.39
CLCN3P51790 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CLCN3P51790 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CLCN3P51790 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLCN3P51790 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CLCN3P51790 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.36□□□□□ -1.39
CLCN3P51790 YES1P1-201ENST00000418510 1628 ntBASIC6.36□□□□□ -1.39
CLCN3P51790 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CLCN3P51790 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLCN3P51790 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms