Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 OR5H7P-201ENST00000514084 930 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 HMGN2P36-201ENST00000529541 409 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 NPM1P5-201ENST00000557228 838 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 COX6CP7-201ENST00000597056 208 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC090607.5-201ENST00000615692 224 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 MIR6133-201ENST00000617057 108 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC005899.7-201ENST00000618199 588 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AP001052.1-201ENST00000626421 99 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 OR4F13P-202ENST00000560066 2054 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 PWAR1-201ENST00000624188 2414 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 OFD1P17-201ENST00000437639 3018 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC144833.1-201ENST00000567953 4089 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 RNA5SP477-201ENST00000362639 119 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 RNU6-316P-201ENST00000391027 107 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 U3.28-201ENST00000391249 210 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 OR5W1P-201ENST00000423705 938 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 BX323845.3-201ENST00000428215 527 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 PCBP2P1-201ENST00000437262 977 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 SNORD125-201ENST00000459538 96 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 RN7SL570P-201ENST00000484405 292 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC009120.1-201ENST00000493458 473 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 Y_RNA.667-201ENST00000516212 107 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 RNA5SP438-201ENST00000516561 112 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 SCARNA6.1-201ENST00000516989 238 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 RN7SKP183-201ENST00000517169 324 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC018809.2-201ENST00000602436 3823 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 AC007786.3-201ENST00000615154 596 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAV27A0A087WT01 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 ADAM24P-201ENST00000398655 2101 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AL133482.1-201ENST00000415988 498 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 LINC02210-201ENST00000444561 288 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AL451063.1-201ENST00000450164 1133 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 GTF2IP4-201ENST00000453092 2054 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AC118758.1-202ENST00000454719 225 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms