Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 RNF19BPY-201ENST00000458209 1550 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 RNA5SP273-201ENST00000362484 113 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 RN7SKP186-201ENST00000365371 303 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC066692.1-201ENST00000421721 457 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 OR5W1P-201ENST00000423705 938 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC092651.1-201ENST00000426110 312 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 TRGV7-201ENST00000427089 353 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 UBE2V2P1-201ENST00000434717 398 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 VN1R110P-201ENST00000438988 971 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC138409.2-202ENST00000507274 458 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 snoU109.5-201ENST00000516231 132 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AP004609.2-201ENST00000532177 190 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC090424.1-201ENST00000535243 736 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC135626.1-201ENST00000556983 435 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC015982.1-201ENST00000608113 465 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AL096712.1-201ENST00000614561 159 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC129778.1-202ENST00000623812 261 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AL591379.1-207ENST00000635982 261 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 OR11H2-202ENST00000641517 1085 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AL359955.1-201ENST00000455242 3275 ntBASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4BQ9Y4P1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC027088.4-201ENST00000611559 1947 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 RNA5SP477-201ENST00000362639 119 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 SUGT1P2-201ENST00000379452 992 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC016739.1-201ENST00000405359 345 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC073410.1-201ENST00000435125 589 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 TUBB4BP6-201ENST00000437576 479 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC104849.1-201ENST00000462623 405 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AL157777.1-201ENST00000468100 304 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 RPL12P24-201ENST00000474907 486 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 OR5H7P-201ENST00000514084 930 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 SETP21-201ENST00000514799 892 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC060775.1-201ENST00000518241 520 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC078899.1-201ENST00000521432 1185 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 WBP1LP3-201ENST00000523033 208 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 AC087468.1-201ENST00000604365 630 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 FO681491.1-202ENST00000623392 737 ntBASIC5.56□□□□□ -1.52
ATG4BQ9Y4P1 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms