Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 RNF10P1-201ENST00000418589 369 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 EIF4E2P2-201ENST00000492033 736 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC011853.1-201ENST00000518911 454 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC139697.1-201ENST00000548429 745 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AGGF1P7-201ENST00000562369 913 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 LINC00556-201ENST00000569603 412 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 DHFRP1-201ENST00000579682 559 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AL121839.2-201ENST00000565058 6943 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 AC027279.4-201ENST00000624371 2072 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC090220.1-201ENST00000593078 1699 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 RNA5SP500-201ENST00000364486 119 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC069154.1-201ENST00000432914 542 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 NDUFS5P5-201ENST00000437256 321 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 REG1CP-206ENST00000447469 496 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 SNORD125-201ENST00000459538 96 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 RPS17P15-201ENST00000475609 349 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 OR5H7P-201ENST00000514084 930 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 RNA5SP438-201ENST00000516561 112 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 IGLV3-30-201ENST00000524362 298 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC027369.2-201ENST00000528030 440 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AP000648.1-201ENST00000529682 397 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AL031601.1-201ENST00000605702 394 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC090607.5-201ENST00000615692 224 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC024884.1-201ENST00000620583 399 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC129778.1-202ENST00000623812 261 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AL591379.1-207ENST00000635982 261 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AL596275.2-207ENST00000641188 675 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC119674.1-217ENST00000641942 1086 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 AC087516.1-201ENST00000561236 2428 ntBASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VPS29Q9UBQ0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VPS29Q9UBQ0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VPS29Q9UBQ0 AC083837.1-201ENST00000565297 2994 ntBASIC5.46□□□□□ -1.53
VPS29Q9UBQ0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.46□□□□□ -1.53
VPS29Q9UBQ0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VPS29Q9UBQ0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.46□□□□□ -1.53
VPS29Q9UBQ0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS29Q9UBQ0 RNA5SP477-201ENST00000362639 119 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms