Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC233289.1-201ENST00000403700 508 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AL590806.1-201ENST00000415818 853 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 PTP4A1P1-201ENST00000420539 515 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 OR5W1P-201ENST00000423705 938 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 HSPE1P16-201ENST00000426640 348 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 SEPT14P24-201ENST00000447236 180 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 RPS26P11-201ENST00000463445 348 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 MYL6P4-201ENST00000477911 453 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC098818.1-201ENST00000478593 252 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 RPS27AP16-201ENST00000492222 470 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 RN7SL187P-201ENST00000495587 303 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC113420.1-201ENST00000507903 571 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AP001636.2-201ENST00000525517 696 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AP005639.1-201ENST00000526939 192 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC079064.1-201ENST00000528365 362 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 OR7E128P-201ENST00000532736 1024 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC125612.1-201ENST00000547580 377 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AL031846.1-201ENST00000560933 314 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 MIR5682-201ENST00000584864 76 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC245036.5-201ENST00000596330 847 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC006386.1-201ENST00000619436 415 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC024023.1-201ENST00000624530 922 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC010624.4-201ENST00000597606 1351 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 RNU6-236P-201ENST00000363886 106 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 RN7SKP237-201ENST00000364663 301 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 SNORA70.3-201ENST00000365075 132 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC092634.1-201ENST00000366505 199 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LCN1P2-201ENST00000372030 223 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 PDCL3P5-201ENST00000398028 722 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AL359715.1-201ENST00000404330 555 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 TMA16P2-201ENST00000413187 601 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC239367.3-201ENST00000428996 814 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 RPL5P2-201ENST00000429598 854 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC114402.2-201ENST00000432760 643 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 AC097499.1-201ENST00000444277 208 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 RN7SL165P-201ENST00000477476 291 ntBASIC6.3□□□□□ -1.4
CCM2LQ9NUG4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms