Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 SNRPEP6-201ENST00000407465 277 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 CYP4F30P-202ENST00000420048 405 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 UBE2V2P1-201ENST00000434717 398 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 TUBB4BP6-201ENST00000437576 479 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC064862.4-201ENST00000442180 334 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC016027.4-201ENST00000450866 277 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AL445665.1-202ENST00000452436 324 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC023141.9-201ENST00000458734 412 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC073594.1-201ENST00000462065 364 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 RN7SL284P-201ENST00000498823 275 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 RNU6-467P-201ENST00000517027 110 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 MTND1P36-201ENST00000522384 936 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 PCNAP4-201ENST00000532690 730 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 SNORD95-201ENST00000579879 68 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 RNU4ATAC-201ENST00000580972 127 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 COX6CP7-201ENST00000597056 208 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 NF1P10-201ENST00000613227 742 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 OR8G3P-202ENST00000641572 1255 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 GNL2P1-201ENST00000451274 2190 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AL592429.1-201ENST00000403909 1473 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 RNU11-201ENST00000387069 134 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 RNU11-6P-201ENST00000391127 133 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 RN7SKP286-201ENST00000410894 299 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 BX119321.1-201ENST00000428912 797 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 MTATP6P17-201ENST00000431030 672 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AP000949.1-201ENST00000438328 629 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AL512593.1-201ENST00000444758 779 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC009963.4-201ENST00000448535 339 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AL122020.1-201ENST00000472287 459 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 OR51A1P-201ENST00000511110 946 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 RPL7L1P4-201ENST00000513004 707 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 IGHV1-14-201ENST00000523391 241 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AP000648.1-201ENST00000529682 397 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC126365.2-201ENST00000580630 379 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AL360012.1-201ENST00000602813 131 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC007423.1-201ENST00000605009 627 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC024589.2-201ENST00000605642 1294 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AL031601.1-201ENST00000605702 394 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC004477.3-201ENST00000614061 590 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AL445649.1-201ENST00000615941 691 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC006927.4-201ENST00000639187 543 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms