Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC009963.3-201ENST00000458090 486 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC021006.1-201ENST00000489849 553 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 ST13P12-201ENST00000508958 1094 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 RN7SKP35-201ENST00000517210 151 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC126615.2-201ENST00000553003 515 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC091078.2-201ENST00000557145 559 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 NANOGP3-201ENST00000605855 286 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC067838.1-201ENST00000606064 577 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AL139099.4-201ENST00000614802 114 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC004801.6-201ENST00000616571 978 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC232271.1-201ENST00000602455 2715 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 PSG10P-201ENST00000501199 1500 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 PPBPP2-201ENST00000513150 1362 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC104966.1-201ENST00000467010 1464 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC093225.1-201ENST00000506867 1408 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 RN7SKP171-201ENST00000364417 303 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 RN7SKP78-201ENST00000364711 318 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 OR13C3-201ENST00000374781 1108 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 MIR130B-202ENST00000385018 82 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 TUBB4BP6-201ENST00000437576 479 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 VN1R110P-201ENST00000438988 971 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC006539.1-201ENST00000481419 501 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AL158068.1-201ENST00000506116 616 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 MIR4502-201ENST00000580432 81 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AP001357.1-201ENST00000586304 1053 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC025857.2-201ENST00000602711 238 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC092944.2-201ENST00000605443 889 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC245014.3-201ENST00000618589 347 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC000095.2-202ENST00000637415 154 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AC073869.7-201ENST00000640874 297 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM5Q96HC4 AL161912.4-201ENST00000623889 2468 ntBASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 HSPD1P7-201ENST00000447985 1686 ntBASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM5Q96HC4 AC090181.3-201ENST00000624777 1514 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms