Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 RNA5SP110-201ENST00000362638 115 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 RN7SKP186-201ENST00000365371 303 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 LYPLA1P3-201ENST00000402650 695 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 CHEK2P5-201ENST00000423877 246 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 FAM204CP-201ENST00000424489 642 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC074386.1-201ENST00000476560 767 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC093719.1-201ENST00000480427 441 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC090058.1-201ENST00000498788 435 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC008945.1-201ENST00000505144 499 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 RNA5SP400-201ENST00000517155 111 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC008429.4-201ENST00000521201 182 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 SNRPGP1-201ENST00000553864 222 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 ZNF322P1-201ENST00000568013 1209 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC010615.3-201ENST00000597319 394 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AL645933.2-201ENST00000606743 1207 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 AC108673.3-201ENST00000609183 335 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM9SF4Q92544 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 RBMY1HP-201ENST00000382759 1389 ntBASIC5.67□□□□□ -1.5
TM9SF4Q92544 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.67□□□□□ -1.5
TM9SF4Q92544 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM9SF4Q92544 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM9SF4Q92544 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM9SF4Q92544 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC015689.2-201ENST00000528172 1738 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM9SF4Q92544 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 OR52B3P-201ENST00000314715 928 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 SNORA81-201ENST00000408493 178 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC009963.4-201ENST00000448535 339 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 AL445665.1-202ENST00000452436 324 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AL122020.1-201ENST00000472287 459 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM9SF4Q92544 OR52A4P-202ENST00000481634 799 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AP003168.1-201ENST00000530091 307 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC068305.2-201ENST00000550567 1205 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 COX6CP7-201ENST00000597056 208 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 AP001267.4-201ENST00000602598 545 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC093388.1-201ENST00000609166 430 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 AL354696.1-201ENST00000614652 497 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC096708.4-201ENST00000620563 552 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 MIPEPP2-201ENST00000422560 1819 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 AC087516.1-201ENST00000561236 2428 ntBASIC5.66□□□□□ -1.5
TM9SF4Q92544 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.66□□□□□ -1.5
TM9SF4Q92544 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms