Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 UBE2V2P2-201ENST00000587677 504 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC008752.3-201ENST00000588113 712 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC008277.2-201ENST00000605196 797 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC106782.6-201ENST00000611264 512 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC145207.9-201ENST00000623802 325 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL589666.2-201ENST00000624603 618 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL049541.2-201ENST00000626377 555 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC079949.2-201ENST00000617117 2933 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL096816.1-201ENST00000623300 2920 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AL034370.1-201ENST00000397254 1590 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 RNU12-2P-201ENST00000364789 156 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 OR7E101P-201ENST00000400428 513 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 ARL4AP5-201ENST00000404372 599 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC002367.1-201ENST00000416765 405 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 NIPA2P1-201ENST00000426223 976 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 RPS7P5-201ENST00000441482 581 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 RPL7P59-201ENST00000447700 943 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 DBIL5P-202ENST00000453414 250 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 RNU7-27P-201ENST00000459281 62 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC015724.1-201ENST00000478577 156 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 RN7SL434P-201ENST00000495872 271 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 MTND3P22-201ENST00000510932 243 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC024589.1-201ENST00000512207 263 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 DEFB131D-201ENST00000526803 184 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 OR8A2P-201ENST00000528631 952 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 PRR13P5-201ENST00000596581 442 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 SLC6A21P-201ENST00000599458 369 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC115286.1-201ENST00000604298 434 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AL021808.1-201ENST00000604325 1117 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AL590560.2-201ENST00000608430 732 ntBASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 SNCA-212ENST00000611107 297 ntTSL 5 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC7.43□□□□□ -1.22
DEPDC4Q8N2C3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms