Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH13P55290 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH13P55290 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CDH13P55290 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH13P55290 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH13P55290 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH13P55290 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH13P55290 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CDH13P55290 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH13P55290 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH13P55290 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH13P55290 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 PSG10P-201ENST00000501199 1500 ntBASIC5.75□□□□□ -1.49
CDH13P55290 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 MTHFD2P5-201ENST00000320415 844 ntBASIC5.75□□□□□ -1.49
CDH13P55290 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDH13P55290 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDH13P55290 MIR7-1-201ENST00000384871 110 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AL356968.2-201ENST00000412769 1257 ntBASIC5.75□□□□□ -1.49
CDH13P55290 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH13P55290 RAB9AP4-201ENST00000415230 609 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.75□□□□□ -1.49
CDH13P55290 AC007064.3-201ENST00000422608 359 ntBASIC5.75□□□□□ -1.49
CDH13P55290 FAM204CP-201ENST00000424489 642 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AC099782.1-201ENST00000425889 474 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH13P55290 MAPRE1P3-201ENST00000435438 796 ntBASIC5.75□□□□□ -1.49
CDH13P55290 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDH13P55290 AL353662.1-201ENST00000439099 327 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH13P55290 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH13P55290 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 RPS27P20-201ENST00000492051 246 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AC106822.1-201ENST00000502647 526 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH13P55290 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH13P55290 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH13P55290 AC136777.2-201ENST00000522979 358 ntBASIC5.75□□□□□ -1.49
CDH13P55290 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 AC126615.2-201ENST00000553003 515 ntBASIC5.75□□□□□ -1.49
CDH13P55290 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.75□□□□□ -1.49
CDH13P55290 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH13P55290 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 AC007346.1-201ENST00000569208 867 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 AL078601.3-201ENST00000573303 535 ntBASIC5.75□□□□□ -1.49
CDH13P55290 MIR744-201ENST00000578242 98 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 AC125494.2-201ENST00000602431 657 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AL133481.2-203ENST00000607558 139 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AC092681.3-201ENST00000609463 678 ntBASIC5.75□□□□□ -1.49
CDH13P55290 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 AC073488.3-201ENST00000631611 778 ntBASIC5.75□□□□□ -1.49
CDH13P55290 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH13P55290 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH13P55290 AL121839.2-201ENST00000565058 6943 ntBASIC5.75□□□□□ -1.49
CDH13P55290 DDX18P6-201ENST00000450119 1997 ntBASIC5.75□□□□□ -1.49
CDH13P55290 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH13P55290 GTF2IP4-201ENST00000453092 2054 ntBASIC5.75□□□□□ -1.49
CDH13P55290 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH13P55290 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH13P55290 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH13P55290 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CDH13P55290 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CDH13P55290 YWHAZP6-201ENST00000399764 738 ntBASIC5.74□□□□□ -1.49
CDH13P55290 MTND3P20-201ENST00000407663 186 ntBASIC5.74□□□□□ -1.49
CDH13P55290 AL354868.1-201ENST00000417077 482 ntBASIC5.74□□□□□ -1.49
CDH13P55290 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH13P55290 CRIP1P1-201ENST00000427567 185 ntBASIC5.74□□□□□ -1.49
CDH13P55290 AC108479.1-201ENST00000431142 427 ntBASIC5.74□□□□□ -1.49
CDH13P55290 AL445928.1-201ENST00000435545 222 ntBASIC5.74□□□□□ -1.49
CDH13P55290 GAPDHP59-201ENST00000435908 267 ntBASIC5.74□□□□□ -1.49
CDH13P55290 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms