Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPS15AP30-201ENST00000420976 390 ntBASIC5.79□□□□□ -1.48
PDX1P52945 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.79□□□□□ -1.48
PDX1P52945 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDX1P52945 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.79□□□□□ -1.48
PDX1P52945 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.79□□□□□ -1.48
PDX1P52945 AC079922.1-201ENST00000443291 359 ntBASIC5.79□□□□□ -1.48
PDX1P52945 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PDX1P52945 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.79□□□□□ -1.48
PDX1P52945 AC073594.1-201ENST00000462065 364 ntBASIC5.79□□□□□ -1.48
PDX1P52945 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.79□□□□□ -1.48
PDX1P52945 RNU6-362P-201ENST00000516736 90 ntBASIC5.79□□□□□ -1.48
PDX1P52945 SNORA70.20-201ENST00000516848 126 ntBASIC5.79□□□□□ -1.48
PDX1P52945 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.79□□□□□ -1.48
PDX1P52945 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.79□□□□□ -1.48
PDX1P52945 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.79□□□□□ -1.48
PDX1P52945 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.79□□□□□ -1.48
PDX1P52945 AC090286.3-201ENST00000573133 187 ntBASIC5.79□□□□□ -1.48
PDX1P52945 OR7E18P-201ENST00000592589 702 ntBASIC5.79□□□□□ -1.48
PDX1P52945 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.79□□□□□ -1.48
PDX1P52945 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.79□□□□□ -1.48
PDX1P52945 AL021918.2-201ENST00000613415 194 ntBASIC5.79□□□□□ -1.48
PDX1P52945 AC003992.1-201ENST00000635364 557 ntBASIC5.79□□□□□ -1.48
PDX1P52945 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.79□□□□□ -1.48
PDX1P52945 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDX1P52945 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDX1P52945 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDX1P52945 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.78□□□□□ -1.48
PDX1P52945 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 AL137141.1-201ENST00000624622 4836 ntBASIC5.78□□□□□ -1.48
PDX1P52945 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDX1P52945 MIR143-201ENST00000385300 106 ntBASIC5.78□□□□□ -1.48
PDX1P52945 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDX1P52945 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.78□□□□□ -1.48
PDX1P52945 MIR1178-201ENST00000408396 91 ntBASIC5.78□□□□□ -1.48
PDX1P52945 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.78□□□□□ -1.48
PDX1P52945 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.78□□□□□ -1.48
PDX1P52945 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 HMGB1P32-201ENST00000425971 565 ntBASIC5.78□□□□□ -1.48
PDX1P52945 AC127526.2-201ENST00000426436 775 ntBASIC5.78□□□□□ -1.48
PDX1P52945 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.78□□□□□ -1.48
PDX1P52945 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.78□□□□□ -1.48
PDX1P52945 AC114728.1-201ENST00000488289 483 ntBASIC5.78□□□□□ -1.48
PDX1P52945 AC008638.1-201ENST00000506035 866 ntBASIC5.78□□□□□ -1.48
PDX1P52945 RNU4-18P-201ENST00000516751 149 ntBASIC5.78□□□□□ -1.48
PDX1P52945 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.78□□□□□ -1.48
PDX1P52945 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 AC006530.1-201ENST00000555980 571 ntBASIC5.78□□□□□ -1.48
PDX1P52945 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.78□□□□□ -1.48
PDX1P52945 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.78□□□□□ -1.48
PDX1P52945 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.78□□□□□ -1.48
PDX1P52945 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.78□□□□□ -1.48
PDX1P52945 AL118556.2-201ENST00000614375 824 ntBASIC5.78□□□□□ -1.48
PDX1P52945 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PDX1P52945 MIR193BHG-214ENST00000641765 509 ntBASIC5.78□□□□□ -1.48
PDX1P52945 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDX1P52945 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.78□□□□□ -1.48
PDX1P52945 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.78□□□□□ -1.48
PDX1P52945 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PDX1P52945 AL662795.2-201ENST00000624252 3706 ntBASIC5.78□□□□□ -1.48
PDX1P52945 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.78□□□□□ -1.48
PDX1P52945 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
PDX1P52945 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDX1P52945 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDX1P52945 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.78□□□□□ -1.48
PDX1P52945 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDX1P52945 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 CCNT2P1-201ENST00000423082 1315 ntBASIC5.77□□□□□ -1.49
PDX1P52945 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDX1P52945 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDX1P52945 RNU105B-201ENST00000364478 208 ntBASIC5.77□□□□□ -1.49
PDX1P52945 AL451142.1-201ENST00000375867 775 ntBASIC5.77□□□□□ -1.49
PDX1P52945 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDX1P52945 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.77□□□□□ -1.49
PDX1P52945 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.77□□□□□ -1.49
PDX1P52945 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.77□□□□□ -1.49
PDX1P52945 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.77□□□□□ -1.49
PDX1P52945 TUBB4BP6-201ENST00000437576 479 ntBASIC5.77□□□□□ -1.49
PDX1P52945 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.77□□□□□ -1.49
PDX1P52945 AC112187.1-201ENST00000455837 479 ntBASIC5.77□□□□□ -1.49
PDX1P52945 AP002371.1-201ENST00000463604 433 ntBASIC5.77□□□□□ -1.49
PDX1P52945 AC023245.1-201ENST00000468501 517 ntBASIC5.77□□□□□ -1.49
PDX1P52945 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 OR51A1P-201ENST00000511110 946 ntBASIC5.77□□□□□ -1.49
PDX1P52945 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms