Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MTATP6P1-201ENST00000514057 681 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 SNORA43.3-201ENST00000517240 103 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 IGLV3-24-201ENST00000517477 197 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 CYCSP22-201ENST00000517555 339 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.73□□□□□ -1.33
NEDD4P46934 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.73□□□□□ -1.33
NEDD4P46934 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.73□□□□□ -1.33
NEDD4P46934 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.73□□□□□ -1.33
NEDD4P46934 AL163952.1-202ENST00000569625 600 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.73□□□□□ -1.33
NEDD4P46934 AC233699.1-201ENST00000569955 1168 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 AP001496.3-201ENST00000580230 913 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.73□□□□□ -1.33
NEDD4P46934 HIRAP1-201ENST00000605318 787 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 AC127024.6-201ENST00000621598 424 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 AC026124.2-201ENST00000621847 656 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.73□□□□□ -1.33
NEDD4P46934 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.73□□□□□ -1.33
NEDD4P46934 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.73□□□□□ -1.33
NEDD4P46934 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.72□□□□□ -1.33
NEDD4P46934 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.72□□□□□ -1.33
NEDD4P46934 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.72□□□□□ -1.33
NEDD4P46934 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.72□□□□□ -1.33
NEDD4P46934 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.72□□□□□ -1.33
NEDD4P46934 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NEDD4P46934 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
NEDD4P46934 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.72□□□□□ -1.33
NEDD4P46934 CCAT2-201ENST00000630920 1752 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
NEDD4P46934 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 RNA5SP326-201ENST00000363209 110 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 RNA5SP122-201ENST00000384457 108 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 AL596448.1-201ENST00000415024 392 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 NME1P1-201ENST00000420914 382 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 NAP1L4P2-201ENST00000425958 899 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.72□□□□□ -1.33
NEDD4P46934 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.72□□□□□ -1.33
NEDD4P46934 DNAJC19P5-201ENST00000443295 316 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 RPL31P15-201ENST00000449770 338 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 RPS23P2-201ENST00000463671 415 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 RPS7P6-201ENST00000485777 579 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 PPIAP19-201ENST00000486414 492 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 DUTP7-201ENST00000507982 486 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 AC138866.2-201ENST00000508650 584 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 SNORA81.2-201ENST00000516868 170 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.72□□□□□ -1.33
NEDD4P46934 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.72□□□□□ -1.33
NEDD4P46934 RN7SL787P-201ENST00000613000 284 ntBASIC6.72□□□□□ -1.33
NEDD4P46934 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEDD4P46934 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.71□□□□□ -1.33
NEDD4P46934 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NEDD4P46934 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.71□□□□□ -1.33
NEDD4P46934 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
NEDD4P46934 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NEDD4P46934 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NEDD4P46934 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.71□□□□□ -1.33
NEDD4P46934 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
NEDD4P46934 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NEDD4P46934 AC009962.1-201ENST00000567327 3813 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
NEDD4P46934 PWAR1-201ENST00000624188 2414 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.71□□□□□ -1.34
NEDD4P46934 AC232271.1-201ENST00000602455 2715 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 RNU6-673P-201ENST00000365084 104 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 RNA5SP131-201ENST00000365452 119 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
NEDD4P46934 SNORA17A-201ENST00000391185 133 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 AC087752.1-201ENST00000391360 558 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEDD4P46934 AC006335.2-201ENST00000437993 330 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.71□□□□□ -1.34
NEDD4P46934 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.71□□□□□ -1.34
NEDD4P46934 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.71□□□□□ -1.34
NEDD4P46934 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.71□□□□□ -1.34
NEDD4P46934 RN7SL284P-201ENST00000498823 275 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 AC025470.1-201ENST00000510053 2032 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.71□□□□□ -1.34
NEDD4P46934 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.71□□□□□ -1.34
NEDD4P46934 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.71□□□□□ -1.34
NEDD4P46934 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.71□□□□□ -1.34
NEDD4P46934 AC016542.2-201ENST00000624201 619 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 SNORA17.5-201ENST00000630429 132 ntBASIC6.71□□□□□ -1.34
NEDD4P46934 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.71□□□□□ -1.34
NEDD4P46934 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEDD4P46934 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.7□□□□□ -1.34
NEDD4P46934 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.7□□□□□ -1.34
NEDD4P46934 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.7□□□□□ -1.34
NEDD4P46934 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.7□□□□□ -1.34
NEDD4P46934 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
NEDD4P46934 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NEDD4P46934 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.7□□□□□ -1.34
NEDD4P46934 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 228.5 ms