Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
RXRBP28702 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RXRBP28702 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RXRBP28702 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RXRBP28702 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RXRBP28702 AC007064.3-201ENST00000422608 359 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AL662874.1-201ENST00000426065 230 ntBASIC8.27□□□□□ -1.09
RXRBP28702 MTND4LP14-201ENST00000429447 288 ntBASIC8.27□□□□□ -1.09
RXRBP28702 TRBV26OR9-2-201ENST00000432077 293 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC8.27□□□□□ -1.09
RXRBP28702 AC091390.1-201ENST00000433904 331 ntBASIC8.27□□□□□ -1.09
RXRBP28702 RPL7P61-201ENST00000451721 751 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC8.27□□□□□ -1.09
RXRBP28702 RPL7AP6-201ENST00000477943 801 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AC004263.1-201ENST00000479327 332 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AC093827.1-201ENST00000480094 861 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AC022415.1-202ENST00000486612 523 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AC107401.1-201ENST00000503426 685 ntBASIC8.27□□□□□ -1.09
RXRBP28702 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RXRBP28702 MTCO3P27-201ENST00000514397 196 ntBASIC8.27□□□□□ -1.09
RXRBP28702 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC8.27□□□□□ -1.09
RXRBP28702 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC8.27□□□□□ -1.09
RXRBP28702 AL356801.1-201ENST00000559320 294 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC8.27□□□□□ -1.09
RXRBP28702 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.27□□□□□ -1.09
RXRBP28702 AC002487.1-201ENST00000604565 994 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AL136131.3-201ENST00000607600 188 ntBASIC8.27□□□□□ -1.09
RXRBP28702 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.27□□□□□ -1.09
RXRBP28702 MIR3974-201ENST00000637126 96 ntBASIC8.27□□□□□ -1.09
RXRBP28702 CDY7P-201ENST00000429883 1604 ntBASIC8.27□□□□□ -1.09
RXRBP28702 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RXRBP28702 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
RXRBP28702 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RXRBP28702 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.27□□□□□ -1.09
RXRBP28702 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RXRBP28702 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 AC010886.1-201ENST00000437380 2869 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC145138.1-201ENST00000512908 2851 ntBASIC8.26□□□□□ -1.09
RXRBP28702 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RXRBP28702 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 RNA5SP394-201ENST00000364216 119 ntBASIC8.26□□□□□ -1.09
RXRBP28702 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 AC005042.1-201ENST00000393397 800 ntBASIC8.26□□□□□ -1.09
RXRBP28702 HMGB1P20-201ENST00000402555 677 ntBASIC8.26□□□□□ -1.09
RXRBP28702 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.26□□□□□ -1.09
RXRBP28702 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 TRIM60P5Y-201ENST00000413946 574 ntBASIC8.26□□□□□ -1.09
RXRBP28702 MTND6P1-201ENST00000417434 424 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC245452.2-201ENST00000435222 392 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC012075.1-201ENST00000436549 580 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 CYCSP51-201ENST00000443545 318 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 RN7SL172P-201ENST00000460535 303 ntBASIC8.26□□□□□ -1.09
RXRBP28702 HMGN1P8-201ENST00000463578 288 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AL355032.1-201ENST00000472981 438 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC8.26□□□□□ -1.09
RXRBP28702 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 RNU5A-4P-201ENST00000516588 111 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.26□□□□□ -1.09
RXRBP28702 OR8G3P-201ENST00000533406 921 ntBASIC8.26□□□□□ -1.09
RXRBP28702 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC8.26□□□□□ -1.09
RXRBP28702 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
RXRBP28702 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 AC090616.1-201ENST00000583895 447 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC015802.2-201ENST00000589690 189 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC020915.5-201ENST00000596836 964 ntBASIC8.26□□□□□ -1.09
RXRBP28702 OR7A11P-201ENST00000597719 953 ntBASIC8.26□□□□□ -1.09
RXRBP28702 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 AL121612.2-201ENST00000612261 482 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AL359513.1-201ENST00000614364 557 ntBASIC8.26□□□□□ -1.09
RXRBP28702 AC010333.3-201ENST00000615100 402 ntBASIC8.26□□□□□ -1.09
RXRBP28702 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 AC095038.2-201ENST00000621464 1070 ntBASIC8.26□□□□□ -1.09
RXRBP28702 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.26□□□□□ -1.09
RXRBP28702 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC8.26□□□□□ -1.09
RXRBP28702 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.26□□□□□ -1.09
RXRBP28702 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RXRBP28702 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RXRBP28702 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RXRBP28702 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RXRBP28702 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.26□□□□□ -1.09
RXRBP28702 AL512662.1-201ENST00000624850 2251 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms