Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RBMY2BP-202ENST00000451071 1156 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 FRG2FP-204ENST00000453982 852 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 PPIAP7-201ENST00000454070 489 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 NDUFA5P5-201ENST00000468361 342 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC098847.1-201ENST00000473094 348 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC079080.1-201ENST00000479841 822 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AP000620.1-201ENST00000527147 504 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC090826.1-203ENST00000569235 490 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 GARSP1-201ENST00000570895 719 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC005726.4-201ENST00000582858 458 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC025857.2-201ENST00000602711 238 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AL138895.2-201ENST00000603019 178 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AL133481.2-203ENST00000607558 139 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AP001437.1-201ENST00000608783 456 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AL355974.3-201ENST00000617383 467 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC022400.9-201ENST00000623633 273 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMBP28068 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMBP28068 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMBP28068 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMBP28068 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMBP28068 QRSL1P1-201ENST00000400977 1540 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMBP28068 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMBP28068 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AP004607.3-201ENST00000530354 3915 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 MFSD8-219ENST00000641228 2559 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC017078.1-201ENST00000416146 368 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 MGAT2P2-201ENST00000427194 797 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 PNKDP1-201ENST00000435914 430 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 RPS7P3-201ENST00000443360 580 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC004129.2-201ENST00000457229 287 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 RBBP4P1-201ENST00000502424 1276 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 OR7E99P-201ENST00000505750 922 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 GTF2IP11-201ENST00000526931 420 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 MIR4310-201ENST00000582950 57 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC060780.2-201ENST00000589047 198 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AL049840.6-201ENST00000604583 345 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC092266.1-201ENST00000610958 165 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 AC104964.3-201ENST00000606115 2860 ntBASIC4.45□□□□□ -1.7
HLA-DMBP28068 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DMBP28068 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMBP28068 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms