Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL354890.1-201ENST00000413730 346 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AL691447.1-201ENST00000419456 387 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 TUBB4BP6-201ENST00000437576 479 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 GEMIN2P1-201ENST00000454246 752 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.18□□□□□ -1.42
PDGFRAP16234 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFRAP16234 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFRAP16234 RNA5SP438-201ENST00000516561 112 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AC060775.1-201ENST00000518241 520 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFRAP16234 AP003080.1-202ENST00000526526 915 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFRAP16234 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PDGFRAP16234 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.18□□□□□ -1.42
PDGFRAP16234 TXNP4-201ENST00000575018 310 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFRAP16234 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFRAP16234 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.18□□□□□ -1.42
PDGFRAP16234 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 AC129778.1-202ENST00000623812 261 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AP001962.1-201ENST00000624114 559 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AC018628.1-201ENST00000624147 3819 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AL591379.1-207ENST00000635982 261 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 AL359955.1-201ENST00000455242 3275 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFRAP16234 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFRAP16234 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PDGFRAP16234 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFRAP16234 AF287957.1-201ENST00000607368 1595 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFRAP16234 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFRAP16234 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PDGFRAP16234 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFRAP16234 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFRAP16234 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PDGFRAP16234 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 LYPLA1P3-201ENST00000402650 695 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 IPPKP1-201ENST00000422501 768 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.17□□□□□ -1.42
PDGFRAP16234 AC092651.1-201ENST00000426110 312 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.17□□□□□ -1.42
PDGFRAP16234 AC073410.1-201ENST00000435125 589 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 OR52Y1P-201ENST00000452418 828 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 RN7SL193P-201ENST00000491708 276 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 AL133372.1-201ENST00000493565 745 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFRAP16234 AC114781.3-201ENST00000512083 142 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 RNU6-943P-201ENST00000516960 98 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 WBP1LP3-201ENST00000523033 208 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 AP004609.2-201ENST00000532177 190 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 AC090424.1-201ENST00000535243 736 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFRAP16234 NANOGNBP2-201ENST00000544753 553 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.17□□□□□ -1.42
PDGFRAP16234 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFRAP16234 MIR4776-2-201ENST00000580204 80 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFRAP16234 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
PDGFRAP16234 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.17□□□□□ -1.42
PDGFRAP16234 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.17□□□□□ -1.42
PDGFRAP16234 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFRAP16234 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PDGFRAP16234 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 RNF19BPY-201ENST00000458209 1550 ntBASIC6.17□□□□□ -1.42
PDGFRAP16234 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PDGFRAP16234 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFRAP16234 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFRAP16234 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFRAP16234 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFRAP16234 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFRAP16234 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFRAP16234 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PDGFRAP16234 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PDGFRAP16234 RN7SKP15-201ENST00000364742 309 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms