Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AC084754.1-201ENST00000463466 464 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 RPS3AP15-201ENST00000483874 781 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 IGLV3-24-201ENST00000517477 197 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 MRPS16P1-201ENST00000523462 412 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AGGF1P7-201ENST00000562369 913 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AL353729.2-201ENST00000605859 1249 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AL352984.2-202ENST00000613699 155 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AC092646.2-201ENST00000431242 2095 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AL161912.4-201ENST00000623889 2468 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 PWAR1-201ENST00000624188 2414 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AC004076.2-201ENST00000620532 3323 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 ZNF658B-201ENST00000602828 3408 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AC005042.1-201ENST00000393397 800 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 MIR1282-201ENST00000408865 101 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AC073072.2-201ENST00000447425 348 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 OR7E157P-201ENST00000494376 911 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 DUTP7-201ENST00000507982 486 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AP004609.2-201ENST00000532177 190 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AC079600.1-201ENST00000550326 297 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 NDUFA5P11-201ENST00000567995 343 ntBASIC5.76□□□□□ -1.49
HLA-DQB2P05538 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DQB2P05538 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 SUMO2P8-201ENST00000434672 286 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AL445665.1-202ENST00000452436 324 ntBASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB2P05538 AC090058.1-201ENST00000498788 435 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms