Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 RN7SL717P-201ENST00000478343 297 ntBASIC6.27□□□□□ -1.41
EBF3Q9H4W6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.27□□□□□ -1.41
EBF3Q9H4W6 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 RNA5SP400-201ENST00000517155 111 ntBASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 ADAD1P2-201ENST00000588476 646 ntBASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AC090330.1-201ENST00000588646 764 ntBASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AL137067.2-201ENST00000621202 131 ntBASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AL357562.1-201ENST00000624911 609 ntBASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AC138627.1-204ENST00000641894 765 ntBASIC6.27□□□□□ -1.41
EBF3Q9H4W6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
EBF3Q9H4W6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AL589826.1-201ENST00000340697 249 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 RNU1-150P-201ENST00000362491 162 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 RN7SKP161-201ENST00000411110 305 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 VN1R48P-201ENST00000448149 1036 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC089999.1-201ENST00000460336 374 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 RN7SL269P-201ENST00000467795 305 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC074386.1-201ENST00000476560 767 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 MTND3P6-201ENST00000485242 339 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 RPA2P3-201ENST00000533268 770 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 EIF1AXP2-201ENST00000555940 413 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC141002.1-201ENST00000607025 279 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC034229.4-201ENST00000607861 441 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 RN7SL787P-201ENST00000613000 284 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC096861.1-201ENST00000616652 240 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AL118508.4-201ENST00000624142 1176 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 NEPNP-201ENST00000404786 1371 ntBASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.26□□□□□ -1.41
EBF3Q9H4W6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 RBPJP7-201ENST00000442803 1447 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 RBPJP5-201ENST00000449433 1447 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AC106872.5-201ENST00000508856 1416 ntBASIC6.25□□□□□ -1.41
EBF3Q9H4W6 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EBF3Q9H4W6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms