Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC020656.2-201ENST00000613291 5309 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 RNA5SP232-201ENST00000364144 119 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 MIR188-201ENST00000385034 86 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 RNA5SP198-201ENST00000410376 127 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 CXCR2P1-202ENST00000443392 1074 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 EEF1B2P3-201ENST00000447718 678 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 CFL1P4-201ENST00000451536 498 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 CCNJP2-201ENST00000457810 1163 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 RN7SL369P-201ENST00000477138 299 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC106822.1-201ENST00000502647 526 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC122718.2-201ENST00000505325 591 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 OR10D4P-201ENST00000525892 951 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC009729.1-201ENST00000548873 1133 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC005632.2-201ENST00000564271 828 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AL078601.3-201ENST00000573303 535 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC007620.3-201ENST00000608131 497 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AP000473.2-201ENST00000602659 1537 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.93□□□□□ -1.46
VMP1Q96GC9 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AC003973.3-201ENST00000624863 2822 ntBASIC5.93□□□□□ -1.46
VMP1Q96GC9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VMP1Q96GC9 AL355488.2-201ENST00000609909 2850 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 AC105235.1-201ENST00000623208 1816 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 AL136984.1-201ENST00000607611 1893 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 AL603750.1-201ENST00000624216 1717 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 CXADRP1-201ENST00000398098 1095 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 AL139805.1-201ENST00000407837 289 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 MTND2P12-201ENST00000417560 1252 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 AC009506.2-201ENST00000420635 840 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 AC092651.1-201ENST00000426110 312 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 RPL31P20-201ENST00000449593 360 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VMP1Q96GC9 AC118758.1-202ENST00000454719 225 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 RARRES2P3-201ENST00000457739 473 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 NPM1P27-201ENST00000502784 830 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 KHDC1P1-201ENST00000511053 508 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 OR4A40P-201ENST00000533878 948 ntBASIC5.92□□□□□ -1.46
VMP1Q96GC9 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VMP1Q96GC9 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms