Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 VPS35P1-201ENST00000563400 1518 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AP001541.1-201ENST00000623322 1904 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 HSPD1P9-201ENST00000420325 1636 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 RNU1-146P-201ENST00000364015 165 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 RNU1-59P-201ENST00000364829 162 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 GCNT1P4-201ENST00000404096 329 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AL121835.1-201ENST00000404250 354 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 RNA5SP156-201ENST00000410250 110 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 RPL24P2-201ENST00000421023 475 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 RCC2P2-201ENST00000422174 918 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 MTND4LP13-201ENST00000425022 298 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC130360.1-201ENST00000425489 1117 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 RPSAP65-201ENST00000429660 595 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AL512637.1-201ENST00000439523 1231 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AL355032.1-201ENST00000472981 438 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC130365.2-201ENST00000525882 1201 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC092865.1-201ENST00000544395 1023 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 MRPS21P8-201ENST00000569196 235 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC124916.2-201ENST00000604416 224 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC008555.7-201ENST00000605008 583 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 GMCL1P2-201ENST00000605230 823 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC022106.1-201ENST00000612834 766 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 U1.25-201ENST00000614085 162 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 U1.31-201ENST00000620022 160 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC003992.1-201ENST00000635364 557 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 AC006484.1-201ENST00000435086 1884 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 EIF3EP1-201ENST00000433978 1316 ntBASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP54Q7Z3B4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 AL356317.1-201ENST00000396110 1436 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 SNORA21-201ENST00000362423 132 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 RNU6-891P-201ENST00000384280 111 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 RPL23AP17-201ENST00000401064 499 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 RPS7P8-201ENST00000418311 581 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 AC016027.5-201ENST00000427227 210 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 XKRYP6-201ENST00000440468 1116 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 XKRYP3-201ENST00000442113 1116 ntBASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP54Q7Z3B4 AC002553.3-201ENST00000453002 341 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms