Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC000041.1-201ENST00000439655 175 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 RPL34P26-201ENST00000445636 354 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 AL358794.1-201ENST00000445689 381 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.89□□□□□ -1.47
SUMO3P55854 RSU1P1-201ENST00000453416 441 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 CEACAMP11-201ENST00000455211 583 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.89□□□□□ -1.47
SUMO3P55854 SNX18P26-201ENST00000458433 740 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC147055.3-201ENST00000510547 851 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 OR4A6P-201ENST00000534364 970 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC027667.1-201ENST00000545814 304 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC025283.1-201ENST00000572039 734 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC024267.2-201ENST00000582737 417 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 MIR5010-201ENST00000582846 120 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 AC233702.7-202ENST00000582941 211 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 AC067852.5-201ENST00000589299 310 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC011374.2-201ENST00000607135 526 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 AC140725.3-201ENST00000616193 880 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.89□□□□□ -1.47
SUMO3P55854 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 NXF4-202ENST00000416098 1465 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SUMO3P55854 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.88□□□□□ -1.47
SUMO3P55854 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SUMO3P55854 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.88□□□□□ -1.47
SUMO3P55854 TNPO1P2-201ENST00000426249 2665 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.88□□□□□ -1.47
SUMO3P55854 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SUMO3P55854 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SUMO3P55854 RNU6-729P-201ENST00000384399 107 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 MIR142-201ENST00000384835 87 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.88□□□□□ -1.47
SUMO3P55854 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.88□□□□□ -1.47
SUMO3P55854 LIPT1P1-201ENST00000415870 1186 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 LINC01347-201ENST00000417964 355 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AC092865.3-201ENST00000425390 1026 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.88□□□□□ -1.47
SUMO3P55854 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.88□□□□□ -1.47
SUMO3P55854 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.88□□□□□ -1.47
SUMO3P55854 YWHAZP2-201ENST00000440317 728 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.88□□□□□ -1.47
SUMO3P55854 TPTE2P3-201ENST00000441562 1189 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AC097499.1-201ENST00000444277 208 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.88□□□□□ -1.47
SUMO3P55854 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 RPS18P1-201ENST00000447840 458 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.88□□□□□ -1.47
SUMO3P55854 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.88□□□□□ -1.47
SUMO3P55854 LRRC37A14P-201ENST00000452297 462 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 CCNJP2-201ENST00000457810 1163 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AC022415.1-202ENST00000486612 523 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.88□□□□□ -1.47
SUMO3P55854 AC015524.1-201ENST00000491585 472 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AC138866.2-201ENST00000508650 584 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SUMO3P55854 GUSBP9-201ENST00000510138 584 ntBASIC5.88□□□□□ -1.47
SUMO3P55854 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.88□□□□□ -1.47
SUMO3P55854 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.88□□□□□ -1.47
SUMO3P55854 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms