Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RPS3AP49-201ENST00000472161 790 ntBASIC5.68□□□□□ -1.5
CENPAP49450 OR9A1P-202ENST00000484361 945 ntBASIC5.68□□□□□ -1.5
CENPAP49450 RN7SL655P-201ENST00000486087 298 ntBASIC5.68□□□□□ -1.5
CENPAP49450 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.68□□□□□ -1.5
CENPAP49450 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.68□□□□□ -1.5
CENPAP49450 RFPL4AP3-201ENST00000515267 345 ntBASIC5.68□□□□□ -1.5
CENPAP49450 MINOS1P4-201ENST00000515470 318 ntBASIC5.68□□□□□ -1.5
CENPAP49450 RNA5SP400-201ENST00000517155 111 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.68□□□□□ -1.5
CENPAP49450 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.68□□□□□ -1.5
CENPAP49450 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 AL121579.2-201ENST00000555466 590 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AL390334.1-201ENST00000556395 450 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AC092868.3-201ENST00000560515 784 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AC084759.1-201ENST00000561168 290 ntBASIC5.68□□□□□ -1.5
CENPAP49450 OR4C49P-201ENST00000563891 900 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.68□□□□□ -1.5
CENPAP49450 AC079148.1-201ENST00000565944 819 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.68□□□□□ -1.5
CENPAP49450 SYPL1P2-201ENST00000582878 727 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AL512430.4-201ENST00000603085 613 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.68□□□□□ -1.5
CENPAP49450 AL450270.1-201ENST00000606160 391 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.68□□□□□ -1.5
CENPAP49450 AC027506.1-201ENST00000621395 198 ntBASIC5.68□□□□□ -1.5
CENPAP49450 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CENPAP49450 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.68□□□□□ -1.5
CENPAP49450 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 HSPD1P8-201ENST00000400121 1658 ntBASIC5.68□□□□□ -1.5
CENPAP49450 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 AC093775.1-201ENST00000624154 1868 ntBASIC5.68□□□□□ -1.5
CENPAP49450 STX3-208ENST00000641815 3236 ntBASIC5.68□□□□□ -1.5
CENPAP49450 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.67□□□□□ -1.5
CENPAP49450 TCP11X1-202ENST00000622971 1372 ntBASIC5.67□□□□□ -1.5
CENPAP49450 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CENPAP49450 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 SNORD35A-201ENST00000363389 86 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC092634.1-201ENST00000366505 199 ntBASIC5.67□□□□□ -1.5
CENPAP49450 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.67□□□□□ -1.5
CENPAP49450 RPL12P23-201ENST00000405880 490 ntBASIC5.67□□□□□ -1.5
CENPAP49450 PTGES3P2-201ENST00000407942 482 ntBASIC5.67□□□□□ -1.5
CENPAP49450 MRPS21P5-201ENST00000417885 231 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC006509.1-201ENST00000420788 634 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.67□□□□□ -1.5
CENPAP49450 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.67□□□□□ -1.5
CENPAP49450 RPL36AP55-201ENST00000454114 305 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.67□□□□□ -1.5
CENPAP49450 AL354872.1-201ENST00000456361 967 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 RN7SL221P-201ENST00000466190 281 ntBASIC5.67□□□□□ -1.5
CENPAP49450 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.67□□□□□ -1.5
CENPAP49450 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.67□□□□□ -1.5
CENPAP49450 AC093325.1-201ENST00000508378 326 ntBASIC5.67□□□□□ -1.5
CENPAP49450 FABP5P6-201ENST00000510588 409 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.67□□□□□ -1.5
CENPAP49450 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.67□□□□□ -1.5
CENPAP49450 SLC25A51P2-201ENST00000535708 889 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.67□□□□□ -1.5
CENPAP49450 AC023080.1-201ENST00000551663 931 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC027176.2-201ENST00000559166 746 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC007494.1-201ENST00000562293 760 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC090651.1-201ENST00000567865 634 ntBASIC5.67□□□□□ -1.5
CENPAP49450 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.67□□□□□ -1.5
CENPAP49450 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 AP001496.3-201ENST00000580230 913 ntBASIC5.67□□□□□ -1.5
CENPAP49450 RPL29P33-201ENST00000587474 316 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.67□□□□□ -1.5
CENPAP49450 AC004805.3-201ENST00000603178 310 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AC067838.1-201ENST00000606064 577 ntBASIC5.67□□□□□ -1.5
CENPAP49450 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 AL008723.3-201ENST00000608926 449 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AL445493.3-201ENST00000619568 477 ntBASIC5.67□□□□□ -1.5
CENPAP49450 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms