Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR188-201ENST00000385034 86 ntBASIC6.33□□□□□ -1.4
SSR1P43307 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSR1P43307 AL034417.1-201ENST00000399343 800 ntBASIC6.33□□□□□ -1.4
SSR1P43307 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 RPL35AP31-201ENST00000418340 337 ntBASIC6.33□□□□□ -1.4
SSR1P43307 RPL12P12-201ENST00000424633 501 ntBASIC6.33□□□□□ -1.4
SSR1P43307 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSR1P43307 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
SSR1P43307 RPS3AP38-201ENST00000435889 763 ntBASIC6.33□□□□□ -1.4
SSR1P43307 AL512593.1-201ENST00000444758 779 ntBASIC6.33□□□□□ -1.4
SSR1P43307 AL589765.3-201ENST00000446084 462 ntBASIC6.33□□□□□ -1.4
SSR1P43307 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.33□□□□□ -1.4
SSR1P43307 KF459542.1-201ENST00000450908 553 ntBASIC6.33□□□□□ -1.4
SSR1P43307 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 CEACAMP11-201ENST00000455211 583 ntBASIC6.33□□□□□ -1.4
SSR1P43307 AC083795.1-201ENST00000491760 320 ntBASIC6.33□□□□□ -1.4
SSR1P43307 AC023424.1-201ENST00000496058 459 ntBASIC6.33□□□□□ -1.4
SSR1P43307 AC113367.2-201ENST00000505749 160 ntBASIC6.33□□□□□ -1.4
SSR1P43307 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.33□□□□□ -1.4
SSR1P43307 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.33□□□□□ -1.4
SSR1P43307 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 AC108103.1-201ENST00000511286 446 ntBASIC6.33□□□□□ -1.4
SSR1P43307 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.33□□□□□ -1.4
SSR1P43307 MRPS21P8-201ENST00000569196 235 ntBASIC6.33□□□□□ -1.4
SSR1P43307 COX6CP7-201ENST00000597056 208 ntBASIC6.33□□□□□ -1.4
SSR1P43307 MIR6813-201ENST00000621638 56 ntBASIC6.33□□□□□ -1.4
SSR1P43307 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSR1P43307 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSR1P43307 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SSR1P43307 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 AC083899.1-201ENST00000454465 3819 ntBASIC6.33□□□□□ -1.4
SSR1P43307 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSR1P43307 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.33□□□□□ -1.4
SSR1P43307 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSR1P43307 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.32□□□□□ -1.4
SSR1P43307 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.32□□□□□ -1.4
SSR1P43307 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSR1P43307 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSR1P43307 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSR1P43307 RNU1-134P-201ENST00000362935 165 ntBASIC6.32□□□□□ -1.4
SSR1P43307 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSR1P43307 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SSR1P43307 SEPT7P2-202ENST00000398921 823 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AC233289.1-201ENST00000403700 508 ntBASIC6.32□□□□□ -1.4
SSR1P43307 RN7SKP146-201ENST00000410242 334 ntBASIC6.32□□□□□ -1.4
SSR1P43307 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSR1P43307 ARAFP2-201ENST00000440565 559 ntBASIC6.32□□□□□ -1.4
SSR1P43307 SEPT14P12-201ENST00000442280 560 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.32□□□□□ -1.4
SSR1P43307 AL590004.3-202ENST00000445883 451 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.32□□□□□ -1.4
SSR1P43307 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.32□□□□□ -1.4
SSR1P43307 OR52I1-201ENST00000450052 1050 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AC016027.4-201ENST00000450866 277 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.32□□□□□ -1.4
SSR1P43307 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.32□□□□□ -1.4
SSR1P43307 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.32□□□□□ -1.4
SSR1P43307 AC116917.1-201ENST00000520558 305 ntBASIC6.32□□□□□ -1.4
SSR1P43307 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.32□□□□□ -1.4
SSR1P43307 BTG1P1-201ENST00000540396 508 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.32□□□□□ -1.4
SSR1P43307 MT1CP-201ENST00000567054 174 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.32□□□□□ -1.4
SSR1P43307 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.32□□□□□ -1.4
SSR1P43307 AC073333.2-201ENST00000603589 769 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AL135999.3-201ENST00000610501 812 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AC006840.1-201ENST00000623069 542 ntBASIC6.32□□□□□ -1.4
SSR1P43307 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.32□□□□□ -1.4
SSR1P43307 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.32□□□□□ -1.4
SSR1P43307 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSR1P43307 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.32□□□□□ -1.4
SSR1P43307 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
SSR1P43307 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSR1P43307 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.32□□□□□ -1.4
SSR1P43307 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSR1P43307 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.31□□□□□ -1.4
SSR1P43307 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
SSR1P43307 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.31□□□□□ -1.4
SSR1P43307 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SSR1P43307 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.31□□□□□ -1.4
SSR1P43307 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSR1P43307 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SSR1P43307 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.31□□□□□ -1.4
SSR1P43307 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.31□□□□□ -1.4
SSR1P43307 RN7SKP166-201ENST00000410812 305 ntBASIC6.31□□□□□ -1.4
SSR1P43307 Z82198.3-201ENST00000421145 199 ntBASIC6.31□□□□□ -1.4
SSR1P43307 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.31□□□□□ -1.4
SSR1P43307 AL139158.1-201ENST00000424719 340 ntBASIC6.31□□□□□ -1.4
SSR1P43307 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.31□□□□□ -1.4
SSR1P43307 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.31□□□□□ -1.4
SSR1P43307 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.31□□□□□ -1.4
SSR1P43307 AC002553.3-201ENST00000453002 341 ntBASIC6.31□□□□□ -1.4
SSR1P43307 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.31□□□□□ -1.4
SSR1P43307 RN7SL591P-201ENST00000496150 292 ntBASIC6.31□□□□□ -1.4
SSR1P43307 GUSBP9-201ENST00000510138 584 ntBASIC6.31□□□□□ -1.4
SSR1P43307 HMGN1P17-201ENST00000513734 295 ntBASIC6.31□□□□□ -1.4
SSR1P43307 MAST4-IT1-201ENST00000514241 658 ntBASIC6.31□□□□□ -1.4
SSR1P43307 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms