Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 RPL7P11-201ENST00000437586 658 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC016691.1-201ENST00000441321 413 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC010240.2-201ENST00000445363 1205 ntBASIC8.59□□□□□ -1.03
RNF40O75150 ARPC3P5-201ENST00000448802 534 ntBASIC8.59□□□□□ -1.03
RNF40O75150 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 RGS5-217ENST00000451759 835 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 AL513533.1-201ENST00000453728 415 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AL583843.1-201ENST00000456070 346 ntBASIC8.59□□□□□ -1.03
RNF40O75150 RN7SL333P-201ENST00000476398 297 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 AC138356.2-201ENST00000521192 667 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC8.59□□□□□ -1.03
RNF40O75150 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC8.59□□□□□ -1.03
RNF40O75150 ELOCP31-201ENST00000540463 467 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 AC005230.1-201ENST00000555418 285 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC8.59□□□□□ -1.03
RNF40O75150 AC092133.1-201ENST00000565828 719 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC025198.1-201ENST00000578331 419 ntBASIC8.59□□□□□ -1.03
RNF40O75150 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 AL158151.4-201ENST00000600965 507 ntBASIC8.59□□□□□ -1.03
RNF40O75150 Z95327.3-201ENST00000610385 572 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC016999.2-201ENST00000614692 556 ntBASIC8.59□□□□□ -1.03
RNF40O75150 RMST_5.1-201ENST00000618704 126 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC079456.1-201ENST00000624010 480 ntBASIC8.59□□□□□ -1.03
RNF40O75150 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.59□□□□□ -1.03
RNF40O75150 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RNF40O75150 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
RNF40O75150 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.59□□□□□ -1.03
RNF40O75150 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
RNF40O75150 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.59□□□□□ -1.04
RNF40O75150 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
RNF40O75150 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
RNF40O75150 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RNF40O75150 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RNF40O75150 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.58□□□□□ -1.04
RNF40O75150 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
RNF40O75150 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.58□□□□□ -1.04
RNF40O75150 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RNF40O75150 AL512662.1-201ENST00000624850 2251 ntBASIC8.58□□□□□ -1.04
RNF40O75150 MIR146B-201ENST00000365699 73 ntBASIC8.58□□□□□ -1.04
RNF40O75150 SNORD65-201ENST00000391079 73 ntBASIC8.58□□□□□ -1.04
RNF40O75150 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RNF40O75150 YWHAZP6-201ENST00000399764 738 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AL109918.1-202ENST00000406724 436 ntBASIC8.58□□□□□ -1.04
RNF40O75150 CTSLP8-201ENST00000413075 967 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.58□□□□□ -1.04
RNF40O75150 SNRPEP10-201ENST00000420249 274 ntBASIC8.58□□□□□ -1.04
RNF40O75150 B3GALNT1P1-201ENST00000420569 975 ntBASIC8.58□□□□□ -1.04
RNF40O75150 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.58□□□□□ -1.04
RNF40O75150 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC8.58□□□□□ -1.04
RNF40O75150 AL050321.1-201ENST00000432363 400 ntBASIC8.58□□□□□ -1.04
RNF40O75150 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.58□□□□□ -1.04
RNF40O75150 AC243962.1-201ENST00000441512 579 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC8.58□□□□□ -1.04
RNF40O75150 AL139135.2-201ENST00000445040 433 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC8.58□□□□□ -1.04
RNF40O75150 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.58□□□□□ -1.04
RNF40O75150 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RNF40O75150 RN7SL272P-201ENST00000487762 289 ntBASIC8.58□□□□□ -1.04
RNF40O75150 RN7SL569P-201ENST00000494652 288 ntBASIC8.58□□□□□ -1.04
RNF40O75150 NPM1P27-201ENST00000502784 830 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC8.58□□□□□ -1.04
RNF40O75150 AC112203.1-201ENST00000506315 1020 ntBASIC8.58□□□□□ -1.04
RNF40O75150 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC8.58□□□□□ -1.04
RNF40O75150 MTND6P2-201ENST00000512226 524 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.58□□□□□ -1.04
RNF40O75150 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC8.58□□□□□ -1.04
RNF40O75150 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.58□□□□□ -1.04
RNF40O75150 OSBPL9P2-201ENST00000526582 1228 ntBASIC8.58□□□□□ -1.04
RNF40O75150 KCTD9P4-201ENST00000526766 1166 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.58□□□□□ -1.04
RNF40O75150 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.58□□□□□ -1.04
RNF40O75150 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
RNF40O75150 AC011611.1-201ENST00000552179 197 ntBASIC8.58□□□□□ -1.04
RNF40O75150 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.58□□□□□ -1.04
RNF40O75150 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.58□□□□□ -1.04
RNF40O75150 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC8.58□□□□□ -1.04
RNF40O75150 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.58□□□□□ -1.04
RNF40O75150 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.58□□□□□ -1.04
RNF40O75150 AC011712.1-201ENST00000588959 234 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.58□□□□□ -1.04
RNF40O75150 PRR13P3-201ENST00000603578 376 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AL355598.1-201ENST00000604169 202 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AC010200.2-201ENST00000605098 235 ntBASIC8.58□□□□□ -1.04
RNF40O75150 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms